Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P06
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 265 2e-71
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 0.43
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 0.43
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 0.43
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 0.43
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 29 4.0
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 29 4.0
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 5.3
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 28 5.3
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 7.0
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 27 9.2
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 27 9.2
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 265 bits (650), Expect = 2e-71
Identities = 121/211 (57%), Positives = 155/211 (73%), Gaps = 5/211 (2%)
Frame = +1
Query: 58 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 237
MSGG AL+EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 238 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 417
E+PADV V+S+R + QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 418 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 597
LL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LAR
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 598 EVLRLRGVLSRDQRW-----DVVVDLFFYRD 675
E+L LRG +SR + +++ DL+FYRD
Sbjct: 181 EILILRGKISRQTGFVLEGKEIMPDLYFYRD 211
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 295 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 465
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 28 RLVVTLTNATMSGGLDLLALSEED-VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVI 204
R+V T + LL +S D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 28 RLVVTLTNATMSGGLDLLALSEED-VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVI 204
R+V T + LL +S D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 122 PPIWERKMLISRWRRTFINAVVTVRT 199
PP + RK+L + WR +++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 122 PPIWERKMLISRWRRTFINAVVTVRT 199
PP + RK+L + WR +++ VT+ T
Sbjct: 100 PPNFARKVLEAEWREMYVDPKVTIET 125
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 217 YAED*LRAYRHHGVYKRTSPSGN*HFPLPNGWSPQA 110
+A+D Y HH V ++ SPS N + G+SP A
Sbjct: 1838 WADDHDLTYTHHDVVRQESPSFNCNISPIKGYSPPA 1873
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 499 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 606
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 550 TKSSHSIGLMWWLLA 594
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 262 EDPADVFVISSRAFGQRAVLKFAAHTGATPIA 357
EDP V +S F +R ++KF A G PI+
Sbjct: 13 EDPV-VSQVSGHIFDRRLIVKFIAENGTDPIS 43
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +1
Query: 340 GATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPL 519
G P+A P Q A+ +P ++ A Q T+A+ + + + D P
Sbjct: 29 GGAPVAVEMQPVYAAYPQQQAYGQPTVV----QAHVVQQPTQATVIISASVKHVDQDKP- 83
Query: 520 RFVDIAIPCNT----KSSHSIGLMWWLL 591
+++ C T ++ HSIG WW++
Sbjct: 84 -YLEYCPRCQTSVTTRTVHSIGTCWWII 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,031,268
Number of Sequences: 27780
Number of extensions: 299943
Number of successful extensions: 695
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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