Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P04
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.65 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.0  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   6.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   7.9  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 164 CHHHRRSWTQRFHQEHDHWNVSS 232
           C  HR    + FH+EHD    SS
Sbjct: 251 CDDHRDRPPRHFHEEHDTRRASS 273


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 54  PFPGLPSRTFRWY 16
           P  G PS +FRWY
Sbjct: 255 PAQGFPSPSFRWY 267


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 410 LKSRLTVWWLSGVHFVYSYNQLLDSECESEQS 315
           L ++ + +W +  +  Y  N  L S+C+  Q+
Sbjct: 3   LSAQFSDYWTNSFYQNYKTNPFLASDCDKNQN 34


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 410 LKSRLTVWWLSGVHFVYSYNQLLDSECESEQS 315
           L ++ + +W +  +  Y  N  L S+C+  Q+
Sbjct: 3   LSAQFSDYWTNSFYQNYKTNPFLASDCDKNQN 34


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 410 LKSRLTVWWLSGVHFVYSYNQLLDSECESEQS 315
           L ++ + +W +  +  Y  N  L S+C+  Q+
Sbjct: 3   LSAQFSDYWTNSFYQNYKTNPFLASDCDKNQN 34


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 19   PSKSSRRKPRKWVRVPSNTLGYW 87
            PS SS +KP K    P +T  +W
Sbjct: 1161 PSTSSWQKPTKPSYRPPSTTNHW 1183


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 84  LDKLKAERERGITIDIALWKFETGKYYVTII 176
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 84  LDKLKAERERGITIDIALWKFETGKYYVTII 176
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 554 NQPSLEPWHFGGRLQHVISVPARNGYESDGS 462
           N PS EP +   R +     P   G E+D S
Sbjct: 373 NYPSYEPTYDNSRREGKQLNPLNKGTEADSS 403


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 429 RLPS*FPQIETHCMVAQWSPFC 364
           RL   F ++   CM  +W P C
Sbjct: 143 RLRKFFDELLFKCMKEKWIPLC 164


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 429 RLPS*FPQIETHCMVAQWSPFC 364
           RL   F ++   CM  +W P C
Sbjct: 376 RLRKFFDELLFKCMKEKWIPLC 397


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 429 RLPS*FPQIETHCMVAQWSPFC 364
           RL   F ++   CM  +W P C
Sbjct: 376 RLRKFFDELLFKCMKEKWIPLC 397


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 19  PSKSSRRKPR 48
           P+K SRRKPR
Sbjct: 257 PTKVSRRKPR 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,041
Number of Sequences: 336
Number of extensions: 3387
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)