Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P04
(601 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 330 9e-92
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 330 1e-91
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 330 1e-91
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 171 5e-44
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 171 7e-44
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 99 4e-22
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 49 5e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 43 3e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 7e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 38 0.001
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.032
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.22
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.39
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.52
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 1.2
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 1.2
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.1
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.8
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 27 2.8
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 2.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 3.7
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 4.8
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 26 4.8
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 26 4.8
SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit |Sc... 25 6.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 6.4
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 8.5
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 8.5
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 8.5
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 330 bits (811), Expect = 9e-92
Identities = 153/197 (77%), Positives = 174/197 (88%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPG
Sbjct: 35 DKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNK
Sbjct: 95 HRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNK 154
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 548
MD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW
Sbjct: 155 MDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212
Query: 549 LVERKEGKAEGKCLIEA 599
E K G +GK L+EA
Sbjct: 213 QKETKAGVVKGKTLLEA 229
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 330 bits (810), Expect = 1e-91
Identities = 152/197 (77%), Positives = 174/197 (88%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPG
Sbjct: 35 DKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNK
Sbjct: 95 HRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNK 154
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 548
MD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW
Sbjct: 155 MDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212
Query: 549 LVERKEGKAEGKCLIEA 599
E K G +GK L+EA
Sbjct: 213 QKETKAGVVKGKTLLEA 229
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 330 bits (810), Expect = 1e-91
Identities = 152/197 (77%), Positives = 174/197 (88%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPG
Sbjct: 35 DKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV VNK
Sbjct: 95 HRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNK 154
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 548
MD+T +S++RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW
Sbjct: 155 MDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGW 212
Query: 549 LVERKEGKAEGKCLIEA 599
E K G +GK L+EA
Sbjct: 213 QKETKAGVVKGKTLLEA 229
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 171 bits (417), Expect = 5e-44
Identities = 80/183 (43%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRT+EK E+EA+E GK S+ +W LD ERE+G T+++ FET +++DAPG
Sbjct: 266 DKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPG 325
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
H+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+LA T G+ L+V +NK
Sbjct: 326 HKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINK 385
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKI-GYNPAA-VAFVPISGWHGDNMLE--PSTKMPW 536
MD +SE R++E ++S +++++ GYN V ++P+S + G N+ + S+ PW
Sbjct: 386 MDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDRVDSSVCPW 445
Query: 537 FKG 545
++G
Sbjct: 446 YQG 448
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 171 bits (416), Expect = 7e-44
Identities = 87/182 (47%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
+ R+++K EA GKGSF YAW+LD + ER RG+T+D+A FE+ K I DAPG
Sbjct: 205 NSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPG 264
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFI MI G S AD AVL+V + FE G +NGQTREHA L LG+ +++V VNK
Sbjct: 265 HRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNK 324
Query: 369 MDSTEPPYSESRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML--EPSTKMPWF 539
+D +SE RF+EIK VS + IK +G+ + V FVPIS G N++ + S W+
Sbjct: 325 LDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWY 382
Query: 540 KG 545
KG
Sbjct: 383 KG 384
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 99.1 bits (236), Expect = 4e-22
Identities = 53/130 (40%), Positives = 78/130 (60%)
Frame = +3
Query: 48 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 227
++G+ SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +
Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138
Query: 228 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRF 407
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVE 191
Query: 408 EEIKKEVSSY 437
E+++ +S Y
Sbjct: 192 MEMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.2 bits (112), Expect = 5e-07
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +3
Query: 81 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 260
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 261 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 374
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 43.2 bits (97), Expect = 3e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 84 LDKLKAERERGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 251
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 252 VAAGTG 269
V A G
Sbjct: 155 VDASQG 160
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.9 bits (94), Expect = 7e-05
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +3
Query: 162 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 341
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 342 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI 440
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 37.5 bits (83), Expect = 0.001
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 54 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTS 227
GK + A+ + + GIT I + F+ G ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 228 QADCAVLIVAAGTG 269
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.1 bits (72), Expect = 0.032
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 159 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 314
Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 159 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 269
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.39
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 171 IIDAPGHRDFIKNMITGTSQADCAVLIV 254
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 87 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 209
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 159 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 254
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 159 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 254
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 148 SNFQRAISMVIPRSRSAFSLSNTQAYLKEPLPISWASFSNFSMVRLSLV 2
S F IS+ +P FSL+ ++ K LPI W S + S V LV
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAVFWGLV 451
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 174 IDAPGHRDFIKNMITGTSQADCAVLIV 254
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 63 SFK-YAWVLDKLKA-ERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 218
+FK Y L+ LK E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 3 AFKPYTEALEVLKKYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 376 PLSHHTVSLDLRKSRRKSLPTSRKLVTIRLPSLS 477
P S +++ +K +LPTS K++T PS+S
Sbjct: 402 PTSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVS 435
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.2 bits (55), Expect = 3.7
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = -1
Query: 433 EETSFLISSNRDSLYGGSVESILFTPTISCLTPSVKASRACSRVCPFFEIPAS-NSPVPA 257
E + + ISSN S S FT + S TP++ S + V + +S +SP+ +
Sbjct: 757 ETSGYTISSN-SSQNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNSSYSSPISS 815
Query: 256 ATISTAQSA*DVPVIMFLMKSLCPGASMMVT*YLPVSNFQRAISMVIPRSRSAFSL-SNT 80
+++++ S + I + P S + + + S F + S+F+L SN+
Sbjct: 816 NSVTSSTSI--ISSIASSSYTSIPSISSIASSFFDASGFTSIYNGTKAGFSSSFALASNS 873
Query: 79 QA 74
++
Sbjct: 874 ES 875
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 245 HGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELP 138
+ AV DH L + ++ + D ++FAG+++P
Sbjct: 28 NAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 421 RKSLPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKE 570
R+S S + + LPS PF++ + + ++P G + KKE
Sbjct: 639 RRSFKPSEEAAKLSLPSRKNPFVSDSAVLKVNKPEMKEGQKKAEARKKKE 688
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 539
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
>SPAC6F6.09 |||NuA4 histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 378 TEPPYSESRFEEIKKEVSSYIKK 446
+EPP + S +E+ KKE+ I+K
Sbjct: 9 SEPPVNVSYYEQCKKELHEMIEK 31
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 275 EFTSTSGDNKHGAVSLRRSSDHVLDE 198
+F S+ + K+G + SSD VLDE
Sbjct: 1234 DFVSSKRNGKNGGSFIEESSDTVLDE 1259
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -3
Query: 248 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPE 135
K G V + + V+DE ++ ++D+G + AG ++ E
Sbjct: 236 KRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFE 273
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 119 HHRY-CSLEVRNRQILCHHH 175
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 420 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 545
KEVS SYI +P +G+ +N+++P + P FKG
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,697,845
Number of Sequences: 5004
Number of extensions: 58554
Number of successful extensions: 233
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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