Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P04
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    25   1.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   7.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   10.0 
AY748830-1|AAV28178.1|   95|Anopheles gambiae cytochrome P450 pr...    23   10.0 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   10.0 
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   10.0 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   10.0 

>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 507 MLEPSTKMPWFKGWLVERKEGKAEGK 584
           M+ P T +  F+G++ ER   K EGK
Sbjct: 532 MVGPGTGLAPFRGFIQERDHCKQEGK 557


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 384 PPYSESRFEEIKKEVSSYIKKIGYNPAAVAF 476
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -3

Query: 431 RDFLLDFLKSRLTVWWLSGVHFVYSYNQLLDSECESEQSVFTRLSVL 291
           R+  ++F K    + +L+ ++  Y Y QL     ESE+++    SV+
Sbjct: 214 REHYIEFQKVCRDIEYLTRLYVSYRYLQLCKGVEESERTIANLQSVI 260


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 439 SRKLVTIRLPSLSYPFLAGTEITCW 513
           SR  V    PS+  P LA    TCW
Sbjct: 170 SRIDVAFASPSICRPDLAANSATCW 194


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 334 SVKASRACSRVCPFFEIPASNSPVP-AATISTA 239
           S++ASR   R CP  E+ +  +P P  A IS A
Sbjct: 15  SLEASRCVHRRCPKNEVYSCCAPCPQKACISEA 47


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 275 EFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGD 165
           E   T  DN +   S + + D+  DE +V    DD D
Sbjct: 754 ENEDTKADNMNNNHSDQLTGDNSADERAVPNDADDDD 790


>AY748830-1|AAV28178.1|   95|Anopheles gambiae cytochrome P450
           protein.
          Length = 95

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 444 KIGYNPAAVAFVPISGWHGDNMLEPS 521
           K   +   V F+PI+G H D    P+
Sbjct: 35  KFTIDKGTVVFIPIAGLHHDPQYYPN 60


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 408  EEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 512
            EE+K+E+       GY P  +A        G+N L
Sbjct: 906  EEVKEELGRERNNAGYTPLQLADAKSHTGQGNNKL 940


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 138 WKFETGKYYVTIIDAPG 188
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 346 CLTPSVKASRACSRVCPFFEIPASNSPVP 260
           C    +K + AC R CP  ++P ++  VP
Sbjct: 265 CPEHLLKDNGACVRKCPKGKMPQNSECVP 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,723
Number of Sequences: 2352
Number of extensions: 14852
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)