Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P04
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 365 e-101
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 365 e-101
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 174 3e-79
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 235 2e-62
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 193 7e-50
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 193 7e-50
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 175 2e-44
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 4e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 4e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 85 4e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 85 4e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 85 4e-17
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 68 6e-12
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 39 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.005
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.21
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.36
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.36
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 1.5
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.5
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.5
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.9
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 5.9
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 5.9
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 5.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 365 bits (897), Expect = e-101
Identities = 171/197 (86%), Positives = 180/197 (91%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPG
Sbjct: 35 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NK
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 548
MDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 155 MDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 214
Query: 549 LVERKEGKAEGKCLIEA 599
VERKEG A GK L+EA
Sbjct: 215 AVERKEGNASGKTLLEA 231
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 365 bits (897), Expect = e-101
Identities = 171/197 (86%), Positives = 180/197 (91%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPG
Sbjct: 35 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NK
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 548
MDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 155 MDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 214
Query: 549 LVERKEGKAEGKCLIEA 599
VERKEG A GK L+EA
Sbjct: 215 AVERKEGNASGKTLLEA 231
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 174 bits (424), Expect(2) = 3e-79
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPG
Sbjct: 35 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVA 257
HRDFIKNMITGTSQADCAVL+VA
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVA 117
Score = 138 bits (334), Expect(2) = 3e-79
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +3
Query: 348 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 527
L+V NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 528 MPWFKGWLVERKEGKAEGKCLIEA 599
MPWFKGW VERKEG A GK L+EA
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEA 197
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 235 bits (574), Expect = 2e-62
Identities = 115/138 (83%), Positives = 121/138 (87%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KYY+TIIDAPG
Sbjct: 35 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
HRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+
Sbjct: 95 HRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSL 151
Query: 369 MDSTEPPYSESRFEEIKK 422
T P S R + I++
Sbjct: 152 RSPTRSPDSSRRSDTIQR 169
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 412 KSRRKSLPTSRKLVTI-RLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERL 576
+S +S +SR+ TI RL LS TE TC P CHGSRDG L+ +KE L
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQS-PDSTETTCLRSPRTCHGSRDGLLNARKETL 206
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 193 bits (471), Expect = 7e-50
Identities = 93/180 (51%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FET + ++DAPG
Sbjct: 198 DSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPG 257
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
H+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK
Sbjct: 258 HKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNK 317
Query: 369 MDSTEPPYSESRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 545
+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 318 LDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 193 bits (471), Expect = 7e-50
Identities = 93/180 (51%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FET + ++DAPG
Sbjct: 216 DSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPG 275
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
H+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK
Sbjct: 276 HKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNK 335
Query: 369 MDSTEPPYSESRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 545
+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 336 LDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 175 bits (426), Expect = 2e-44
Identities = 81/182 (44%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPG 188
DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPG
Sbjct: 137 DKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPG 196
Query: 189 HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 368
H+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNK
Sbjct: 197 HKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNK 256
Query: 369 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST--KMPWF 539
MD + E RF+EI+ +++ +++K+G+NP + +VP SG G + + T + W+
Sbjct: 257 MDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEGNWY 316
Query: 540 KG 545
G
Sbjct: 317 SG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 88.2 bits (209), Expect = 4e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 263
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 264 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 443
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 444 KIGYNPAAVAFV 479
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 88.2 bits (209), Expect = 4e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 263
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 264 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIK 443
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 444 KIGYNPAAVAFV 479
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 85.0 bits (201), Expect = 4e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 263
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 264 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 437
G QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 438 IKKIGY 455
+ + GY
Sbjct: 197 LNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 85.0 bits (201), Expect = 4e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 263
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 264 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 437
G QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 438 IKKIGY 455
+ + GY
Sbjct: 198 LNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 85.0 bits (201), Expect = 4e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 263
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 264 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSY 437
G QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 438 IKKIGY 455
+ + GY
Sbjct: 198 LNEFGY 203
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 107
DKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 35 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +3
Query: 81 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 260
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 261 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 374
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 165 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 344
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 345 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 515
++I+ +NK D E +S+ E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 54 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 230
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 231 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 374
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 263
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 264 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 374
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 81 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 260
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 261 GTG 269
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 162 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 341
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 342 KQLIVGVNKMDSTEPPYSESRFEEI 416
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 254
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 84 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 254
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 367 LFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 239
LF PT+SC+ AS S P PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.36
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 87 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 251
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 252 VAAGTG 269
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.36
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 87 DKLKAERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 251
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 252 VAAGTG 269
V A G
Sbjct: 107 VDAHEG 112
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 185 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 96
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 120 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 269
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 171 IIDAPGHRDFIKNMITGTSQADCAVLIV 254
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 120 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 269
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 110
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 9 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 110
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 138 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 260
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = -1
Query: 376 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFLMK 197
++ +F P + + +A C C FF+ P S + ++T A +P M +K
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPT-MIRLK 208
Query: 196 SLCPGASMMVT*YLPVS-NFQRAISMVIPRSRSAFSLSNTQAYL 68
G + + +P + F +S++I S+ + ++ +L
Sbjct: 209 EQGIGTTNNIPDVVPAACCFDNVVSLLIFSVTSSVTFTHDAFFL 252
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = -1
Query: 376 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFLMK 197
++ +F P + + +A C C FF+ P S + ++T A +P M +K
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPT-MIRLK 208
Query: 196 SLCPGASMMVT*YLPVS-NFQRAISMVIPRSRSAFSLSNTQAYL 68
G + + +P + F +S++I S+ + ++ +L
Sbjct: 209 EQGIGTTNNIPDVVPAACCFDNVVSLLIFSVTSSVTFTHDAFFL 252
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 78 WVLDKLKAERERGITIDIALWKFETGKYYVTII 176
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 254 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 123
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 254 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 123
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 78 WVLDKLKAERERGITIDIALWKFETGKYYVTII 176
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 78 WVLDKLKAERERGITIDIALWKFETGKYYVTII 176
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 254 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 123
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 254 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 123
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,867,219
Number of Sequences: 27780
Number of extensions: 323850
Number of successful extensions: 1216
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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