Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P02
(591 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7RGB5 Cluster: Var1p; n=2; Plasmodium|Rep: Var1p - Pla... 34 2.2
UniRef50_Q4DHK7 Cluster: Putative uncharacterized protein; n=2; ... 34 2.2
UniRef50_A5IZ95 Cluster: Glycerol transporter subunit B; n=6; My... 34 2.9
UniRef50_Q8IJE1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q23R47 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_Q4DAZ2 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q8I421 Cluster: Putative uncharacterized protein PFE040... 33 6.6
UniRef50_Q182M2 Cluster: Sensor protein; n=4; Bacteria|Rep: Sens... 32 8.7
UniRef50_Q4U8N2 Cluster: DNA polymerase epsilon (Catalytic subun... 32 8.7
UniRef50_A0DZQ9 Cluster: Chromosome undetermined scaffold_70, wh... 32 8.7
>UniRef50_Q7RGB5 Cluster: Var1p; n=2; Plasmodium|Rep: Var1p -
Plasmodium yoelii yoelii
Length = 314
Score = 34.3 bits (75), Expect = 2.2
Identities = 25/112 (22%), Positives = 50/112 (44%)
Frame = -2
Query: 584 HHIKFTYTHTHIRHYFIYNTQYAPVQKNVYIYIQCKKLL*IYVQKGWTVSCFRFMILFLF 405
H+I + I+ I+ +Q + K+ +IY ++ +Y+ T + + ++L
Sbjct: 121 HYIITNFDSNEIKSVLIFLSQTNKIYKDSFIYCLTHRITDLYINNLCTA---KILAIYLH 177
Query: 404 LNILVYDLLLVSHKRFINYQNYEFIYQIHPFLIKSNNYKHWNGRLNSSDAAL 249
N+L + +S K N+ IY +P+L SN H NS ++ +
Sbjct: 178 -NLLHFTKHKISKKNRFNHTIRNIIYNTYPWL-NSNKNSHNTQTTNSINSEI 227
>UniRef50_Q4DHK7 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 310
Score = 34.3 bits (75), Expect = 2.2
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 422 MILFLFLNILVYDLLLVSHKRFINYQNY-EFIYQIHPFLIKSNNYKHWNGRLNSSDAALQ 246
+ILF L+I+V+D LL +H F +Y Y F + + S+ Y + G NS ++L
Sbjct: 87 LILFGVLSIVVFDALLFTHAEFAHYFIYGTFCFACMMCMGCSSIYHLFLGHENSLLSSLM 146
Query: 245 ASLIYY 228
L YY
Sbjct: 147 QQLDYY 152
>UniRef50_A5IZ95 Cluster: Glycerol transporter subunit B; n=6;
Mycoplasma|Rep: Glycerol transporter subunit B -
Mycoplasma agalactiae
Length = 331
Score = 33.9 bits (74), Expect = 2.9
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = -2
Query: 455 QKGWTVSCFRFMILFLFLNILVYDLLLVSHKRFINYQNYEFIYQIHPFLIKSNNYKHWNG 276
QK WTVS M+L L + ILV+ L+ + H + + I+ + NNY +
Sbjct: 16 QKVWTVSKITLMLLPLLIFILVFTLVPILHTFVKSLKAPISIHDRTRYNYNFNNYNNILS 75
Query: 275 RLNSSDAALQASLIYY 228
N +A L ++L+ +
Sbjct: 76 DPNFKNAVLNSTLVLF 91
>UniRef50_Q8IJE1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 420
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 381 KIIY*DV*KKKQNHKSKTTHCPSLLNIYL*QFFTLNIYIYILLYWCVLCIIY 536
K IY + KK+N+ +K H ++IY + + IY+Y+ +Y V IY
Sbjct: 47 KEIYKHIMNKKKNYINKAYHPQMYIHIYKHIYVYVYIYVYVYIYVYVYIFIY 98
>UniRef50_Q23R47 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1453
Score = 33.5 bits (73), Expect = 3.8
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Frame = -2
Query: 578 IKFTYTHTHIRHYFIYNTQYAPVQKNVYIY-------IQCKKLL*IYVQK-GWTVSCFRF 423
+K+ +T+I +Y + VY++ IQ L IY K V+ +
Sbjct: 933 LKYFSNYTYISYYEYMRMATQVTNRPVYVFEVMNSYDIQVLILDSIYHTKFAVKVNFYYE 992
Query: 422 MILFL-FLNILVYDLLLVSHKRFINYQNYEFIYQIHPFLIKSNNYKHWNGRLNSSDAALQ 246
M+ F+ FLN+++Y+ + + Y NY++I+ + + N K++N ++N + L
Sbjct: 993 MLYFINFLNVMMYNKYDGGYSQESMYANYQYIFMSLEDVYRM-NLKNFNSQINETKLLLT 1051
Query: 245 ASLIYYS 225
L+ S
Sbjct: 1052 IQLVLIS 1058
>UniRef50_Q4DAZ2 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1036
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 569 TYTHTHIRHYFIYNTQYAPVQKNVYIYIQCKKLL*IYVQKGWTV 438
T+THTH+R +Y + + +YIYI C K+ V W V
Sbjct: 95 THTHTHVRK------EYKLLNRQIYIYIYCNKIRVAAVSTVWCV 132
>UniRef50_Q8I421 Cluster: Putative uncharacterized protein PFE0405c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFE0405c - Plasmodium falciparum (isolate 3D7)
Length = 414
Score = 32.7 bits (71), Expect = 6.6
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 405 KKKQNHKSKTTHCPSLLNIYL*QFFTLNIYIYILLYWCVLCIIYKIMSYMRMCICKLYMM 584
KKK+ K K + ++ Y+ Q+ + YIYI +Y C+ +Y + IC L
Sbjct: 170 KKKKKKKKKNIYIWNIYMEYIYQYDHTHTYIYIYIYICIYFYVY-------VYICVLISP 222
Query: 585 CT 590
CT
Sbjct: 223 CT 224
>UniRef50_Q182M2 Cluster: Sensor protein; n=4; Bacteria|Rep: Sensor
protein - Clostridium difficile (strain 630)
Length = 432
Score = 32.3 bits (70), Expect = 8.7
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 456 NIYL*QFFTLNIYIYILLYWCVLCIIYKIMSYMRMCICKLYMM 584
++YL FF + +I+++++ V+ IIY + Y+ + K+Y +
Sbjct: 107 SLYLKSFFKESFFIFLMMFIVVIGIIYYFIRYINKRLSKIYFI 149
>UniRef50_Q4U8N2 Cluster: DNA polymerase epsilon (Catalytic
subunit), putative; n=3; Theileria|Rep: DNA polymerase
epsilon (Catalytic subunit), putative - Theileria
annulata
Length = 2210
Score = 32.3 bits (70), Expect = 8.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -3
Query: 247 KLHLYITQNILTYYFDYL*ARKRLRHLHFTKITLLILRINLCLVQDYLNLNGQDCQLWVK 68
K H+++T N + F Y+ R + +H K++ L L L LN+ DC WV+
Sbjct: 385 KPHIFVTYNGDNFDFPYVNRRAEINGIHMNKVSGLHLSSELFQHAAILNM---DCYKWVE 441
Query: 67 EISRL 53
S L
Sbjct: 442 RDSYL 446
>UniRef50_A0DZQ9 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 728
Score = 32.3 bits (70), Expect = 8.7
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -2
Query: 530 NTQYAPVQKNVYIYIQCKKLL*IYVQKGWTVSCFRFMILFLFLNILVYDLLLVSHKRFIN 351
N QY + +I +L+ +VQ G V F ++ F + LV +LL+ FI
Sbjct: 111 NGQYMSITPTKFIN-HVTQLVKAFVQFGLLVGLF----IYYFEDQLVSSILLIIMMLFIQ 165
Query: 350 YQNY-EFIYQIHPFLIKSNNYKHWNGRLNSS 261
YQNY + I I P K Y N LN S
Sbjct: 166 YQNYRQNIKLIEP--NKEEQYFSSNANLNGS 194
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,728,618
Number of Sequences: 1657284
Number of extensions: 10864748
Number of successful extensions: 28925
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28687
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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