Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_P01
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 298 2e-81
03_01_0034 + 318432-318825,318902-319851 296 1e-80
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 296 1e-80
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 296 1e-80
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 295 2e-80
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 295 2e-80
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 294 4e-80
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 290 8e-79
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 125 4e-29
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 121 6e-28
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 121 6e-28
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 120 1e-27
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 52 3e-07
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 3.3
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 3.3
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 29 4.4
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 4.4
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 5.8
11_01_0595 + 4732330-4732723,4732839-4732903,4733023-4733143,473... 28 7.6
08_02_0787 - 21200762-21201142 28 7.6
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 28 7.6
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 7.6
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 298 bits (732), Expect = 2e-81
Identities = 134/151 (88%), Positives = 147/151 (97%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPPRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 296 bits (726), Expect = 1e-80
Identities = 134/151 (88%), Positives = 145/151 (96%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 296 bits (726), Expect = 1e-80
Identities = 133/151 (88%), Positives = 146/151 (96%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+Q
Sbjct: 296 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ 355
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 356 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 415
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 416 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 296 bits (726), Expect = 1e-80
Identities = 133/151 (88%), Positives = 146/151 (96%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ 334
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 295 bits (725), Expect = 2e-80
Identities = 132/151 (87%), Positives = 146/151 (96%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+Q
Sbjct: 455 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ 514
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 515 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAF 574
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 575 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 605
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 295 bits (725), Expect = 2e-80
Identities = 133/151 (88%), Positives = 146/151 (96%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 294 bits (722), Expect = 4e-80
Identities = 133/151 (88%), Positives = 146/151 (96%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+Q
Sbjct: 275 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ 334
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAF 394
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYTGEGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 395 LHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 290 bits (711), Expect = 8e-79
Identities = 130/151 (86%), Positives = 144/151 (95%)
Frame = +1
Query: 10 SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 189
SRGSQQYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+Q
Sbjct: 291 SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQ 350
Query: 190 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAF 369
NKNSSYFVEWIPNNVK++VCDIPP GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAF
Sbjct: 351 NKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAF 410
Query: 370 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 462
LHWYT EGMDEMEFTEAESNMNDLV+EYQQY
Sbjct: 411 LHWYTSEGMDEMEFTEAESNMNDLVAEYQQY 441
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 125 bits (301), Expect = 4e-29
Identities = 56/152 (36%), Positives = 91/152 (59%), Gaps = 8/152 (5%)
Frame = +1
Query: 28 YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 207
+ L+VPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 283 HEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQ 342
Query: 208 FVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRK 363
FV+W P K + PP ++ A I N+TA+ E+F RI +F M+ ++
Sbjct: 343 FVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKR 402
Query: 364 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 459
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 403 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 121 bits (291), Expect = 6e-28
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 8/152 (5%)
Frame = +1
Query: 28 YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 207
+ L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 283 HEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ 342
Query: 208 FVEWIPNNVKTAVCDIPPR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRK 363
FV+W P K + PP ++ A I NST++ E+F RI +F M+ ++
Sbjct: 343 FVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKR 402
Query: 364 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 459
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 403 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 121 bits (291), Expect = 6e-28
Identities = 53/148 (35%), Positives = 90/148 (60%), Gaps = 8/148 (5%)
Frame = +1
Query: 40 TVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 219
+VPE+T +F+ ++MA CDPRHG+Y+ ++RG + K+V+ + +I+ + + FV+W
Sbjct: 368 SVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDW 427
Query: 220 IPNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 375
P K + PP + + A I N+TA+ E+F RI +F M+ ++AF+H
Sbjct: 428 CPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVH 487
Query: 376 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 459
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 488 WYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 120 bits (288), Expect = 1e-27
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 8/152 (5%)
Frame = +1
Query: 28 YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSY 207
+ L+V E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 283 HEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQ 342
Query: 208 FVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRK 363
FV+W P K + PP ++ A I NST++ E+F RI +F M+ ++
Sbjct: 343 FVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKR 402
Query: 364 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 459
AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 403 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Frame = +1
Query: 31 RALTVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLNIQNK 195
R TV ++ +++ KN+M + R+ +Y+++ I +G + +V E + I+ +
Sbjct: 286 RKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRER 345
Query: 196 NSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLH 375
F+EW P +++ + GL +A N T+I+ LF + Q+ + +++AFL
Sbjct: 346 KLVNFIEWGPASIQVS-------GLMLA-----NHTSIRHLFSKCLGQYEKLRKKQAFLD 393
Query: 376 WYTG----EGMDEMEFTEAESNMNDLVSEYQ 456
Y E D EF E+ + LV EY+
Sbjct: 394 NYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 402 LVH-ALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHG 241
LVH ALA + A+ + +RDAL L + + GRR +AG A G
Sbjct: 96 LVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAG 150
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -3
Query: 438 IVHVALRLRELHLVHALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAG 259
+VH A LHLVHA++ V L E S EL D + L V + R AG
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTSLVRTKARIVEGDAG 124
Query: 258 R 256
+
Sbjct: 125 K 125
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 ARGSRG--SQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQ 174
A GS G S+Q A Q+ + + C R +LT FR + V +
Sbjct: 68 AEGSSGRCSEQEHAKLGERDQQEWLSGERFLTDCKRRESPFLTRRERFRNEFMRRVVPWE 127
Query: 175 MLNIQNKNSSYFVEWIPNNVKTAVC 249
N+ +N Y+V++ + +C
Sbjct: 128 KGNLTWQNFPYYVKYDARTTCSVLC 152
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 446 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 324
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 425 LSASVNSISSMPSPVYQCKKALRLNIAVN 339
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>11_01_0595 +
4732330-4732723,4732839-4732903,4733023-4733143,
4733596-4733687,4733850-4733915,4734106-4734125,
4734147-4734239,4734358-4734445,4734570-4734635,
4734728-4734843,4735410-4735500,4736133-4736234,
4736342-4736425,4736551-4736643,4736728-4736823,
4736914-4736999,4737528-4737606,4737675-4737788,
4737890-4737985,4738060-4738123,4738221-4738510,
4738901-4738956,4739060-4739177,4739287-4739367,
4739683-4739762,4740001-4740055,4740142-4740211,
4740279-4740468,4740567-4740690,4741055-4741129,
4741217-4741390
Length = 1112
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 276 HLQSAGRDV-AHGGLHVVRDPFHEVRRV 196
H + G +V A GGLHV+ HE RR+
Sbjct: 742 HCSTEGAEVKALGGLHVIGTSLHESRRI 769
>08_02_0787 - 21200762-21201142
Length = 126
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 150 HTTTEDGCDGEVTAVTRVTRRHHVLSVE 67
H E G DGE AVTR+ RR V + E
Sbjct: 99 HQVVEVGDDGEGAAVTRLRRRRMVRTCE 126
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 148 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM---AATFIGNSTAIQEL 318
++MKE+DE++ + +++ Y ++ I N + PR L M A +G + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178
Query: 319 FKRI 330
K +
Sbjct: 179 MKML 182
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 446 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 324
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,459,937
Number of Sequences: 37544
Number of extensions: 273081
Number of successful extensions: 950
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -