Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_P01
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    40   7e-05
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    40   7e-05
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    40   7e-05
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    40   7e-05
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.8  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   6.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.6  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 10  SRGSQQYRALTVPELTQQ 63
           SRGSQQYRALTVPELTQQ
Sbjct: 171 SRGSQQYRALTVPELTQQ 188


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 10  SRGSQQYRALTVPELTQQ 63
           SRGSQQYRALTVPELTQQ
Sbjct: 171 SRGSQQYRALTVPELTQQ 188


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 10  SRGSQQYRALTVPELTQQ 63
           SRGSQQYRALTVPELTQQ
Sbjct: 171 SRGSQQYRALTVPELTQQ 188


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 10  SRGSQQYRALTVPELTQQ 63
           SRGSQQYRALTVPELTQQ
Sbjct: 171 SRGSQQYRALTVPELTQQ 188


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 446 ETRSFMLLSASVNSISSMPSPVYQCKKALR-LNIAVN 339
           +TR+  +L  S N+I S+P  ++     LR LNI+ N
Sbjct: 169 QTRNLEVLDLSTNNIWSLPDHLFCSLSGLRSLNISSN 205


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -3

Query: 384 GVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV----AHGGLHVVRDP 217
           GVPV   +      EL    LE +      +++    + S G+D+    A   L+V+ DP
Sbjct: 81  GVPVPVRMQGSFPPELASTPLEDI--DSFYSNQRTFVVISKGKDIFRFSATNALYVL-DP 137

Query: 216 FHEVRRVLVLNVKHLL 169
           F+ +RRV +  + H L
Sbjct: 138 FNPIRRVAIYILVHPL 153


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 255 DVAHGGLHVVRDPFHEVRRVLVL 187
           D+   GLH+   P H+  R LVL
Sbjct: 411 DLTKKGLHISDIPLHDASRDLVL 433


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 243 GGLHVVRDPFHEVRRV 196
           G +HV+R  FH +R++
Sbjct: 357 GNIHVIRKSFHALRQL 372


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 243 GGLHVVRDPFHEVRRV 196
           G +HV+R  FH +R++
Sbjct: 357 GNIHVIRKSFHALRQL 372


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,678
Number of Sequences: 2352
Number of extensions: 9655
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)