Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_O14
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.53 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   5.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 556 HIQSTAIVDHHQ 521
           H+QSTA+ DHH+
Sbjct: 150 HLQSTAVQDHHR 161


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 335 YNERSLRKLIENLDCYKDK 279
           Y +     L+ENLD Y DK
Sbjct: 56  YQKARTFNLVENLDNYNDK 74


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 335 YNERSLRKLIENLDCYKDK 279
           Y +     L+ENLD Y DK
Sbjct: 56  YQKARTFNLVENLDNYNDK 74


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +3

Query: 111 KIYRYFYYGNRM*HFEEKKKAYNNNKISYHLNFN 212
           K   Y  Y N   ++      YNNN    + N N
Sbjct: 323 KYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNIN 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,514
Number of Sequences: 438
Number of extensions: 3506
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)