Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_O13
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 245 5e-65
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 245 5e-65
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 245 5e-65
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 245 5e-65
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 245 5e-65
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 58 8e-09
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 58 8e-09
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 44 2e-04
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 44 2e-04
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 44 2e-04
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 32 0.61
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 32 0.61
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 32 0.61
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 32 0.61
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 32 0.61
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 32 0.61
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 245 bits (599), Expect = 5e-65
Identities = 117/163 (71%), Positives = 132/163 (80%)
Frame = +2
Query: 179 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 358
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 359 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 538
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 539 KAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLGAL 667
KAQLVVIAHDVDP+ELVLFLPALCR MGVPYCIVKGK+RLG L
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 245 bits (599), Expect = 5e-65
Identities = 117/163 (71%), Positives = 132/163 (80%)
Frame = +2
Query: 179 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 358
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 359 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 538
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 539 KAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLGAL 667
KAQLVVIAHDVDP+ELVLFLPALCR MGVPYCIVKGK+RLG L
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 245 bits (599), Expect = 5e-65
Identities = 117/163 (71%), Positives = 132/163 (80%)
Frame = +2
Query: 179 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 358
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 359 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 538
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 539 KAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLGAL 667
KAQLVVIAHDVDP+ELVLFLPALCR MGVPYCIVKGK+RLG L
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 245 bits (599), Expect = 5e-65
Identities = 117/163 (71%), Positives = 132/163 (80%)
Frame = +2
Query: 179 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 358
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 359 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 538
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 539 KAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLGAL 667
KAQLVVIAHDVDP+ELVLFLPALCR MGVPYCIVKGK+RLG L
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 245 bits (599), Expect = 5e-65
Identities = 117/163 (71%), Positives = 132/163 (80%)
Frame = +2
Query: 179 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 358
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 359 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 538
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 539 KAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLGAL 667
KAQLVVIAHDVDP+ELVLFLPALCR MGVPYCIVKGK+RLG L
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 58.4 bits (135), Expect = 8e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +2
Query: 488 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLG 661
N LR G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 58.4 bits (135), Expect = 8e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +2
Query: 488 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRLG 661
N LR G N TK + + A +VV+A D +PIE++L LP LC VPY V+ K LG
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALG 89
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 479 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRL 658
K LR G V + K + + + A DV P++++ LPA+C G+PY ++ L
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
Query: 659 GA 664
GA
Sbjct: 122 GA 123
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 479 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRL 658
K LR G V + K + + + A DV P++++ LPA+C G+PY ++ L
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
Query: 659 GA 664
GA
Sbjct: 122 GA 123
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 479 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCR*MGVPYCIVKGKSRL 658
K LR G V + K + + + A DV P++++ LPA+C G+PY ++ L
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADL 121
Query: 659 GA 664
GA
Sbjct: 122 GA 123
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 482 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 583
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 482 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 583
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 482 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 583
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 482 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 583
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 482 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 583
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.61
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 482 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 583
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,227,563
Number of Sequences: 53049
Number of extensions: 539930
Number of successful extensions: 1288
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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