Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_O07
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075547-1|AAL68354.1|  180|Drosophila melanogaster RH49123p pro...    33   0.40 
AE014296-368|AAN11500.1|  180|Drosophila melanogaster CG12023-PB...    33   0.40 
AE014296-367|AAF47577.2|  354|Drosophila melanogaster CG12023-PA...    33   0.40 

>AY075547-1|AAL68354.1|  180|Drosophila melanogaster RH49123p
           protein.
          Length = 180

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 24/93 (25%), Positives = 42/93 (45%)
 Frame = +3

Query: 333 VWEERSNDTPDPNALWRPRPFNTQPRYTHVVYKASVPEHMHLNNAQRFVNSYIPIHRPIK 512
           VWE++S+D P+PN      P  ++PR   +      P   + NN     N+Y      + 
Sbjct: 55  VWEDQSDDVPNPNPYVYVLPPPSRPRTWAIPAGPYAPP--NYNNLPPKGNNY----GQLA 108

Query: 513 AEPVQNYFTPAQLLSSRNLPGIGLRYIVPVYAK 611
           +       T    L+++ +PG+G++Y   V  K
Sbjct: 109 SNSYSGGVTSVPGLAAQYVPGVGIKYTAIVSDK 141


>AE014296-368|AAN11500.1|  180|Drosophila melanogaster CG12023-PB,
           isoform B protein.
          Length = 180

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 24/93 (25%), Positives = 42/93 (45%)
 Frame = +3

Query: 333 VWEERSNDTPDPNALWRPRPFNTQPRYTHVVYKASVPEHMHLNNAQRFVNSYIPIHRPIK 512
           VWE++S+D P+PN      P  ++PR   +      P   + NN     N+Y      + 
Sbjct: 55  VWEDQSDDVPNPNPYVYVLPPPSRPRTWAIPAGPYAPP--NYNNLPPKGNNY----GQLA 108

Query: 513 AEPVQNYFTPAQLLSSRNLPGIGLRYIVPVYAK 611
           +       T    L+++ +PG+G++Y   V  K
Sbjct: 109 SNSYSGGVTSVPGLAAQYVPGVGIKYTAIVSDK 141


>AE014296-367|AAF47577.2|  354|Drosophila melanogaster CG12023-PA,
           isoform A protein.
          Length = 354

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 24/93 (25%), Positives = 42/93 (45%)
 Frame = +3

Query: 333 VWEERSNDTPDPNALWRPRPFNTQPRYTHVVYKASVPEHMHLNNAQRFVNSYIPIHRPIK 512
           VWE++S+D P+PN      P  ++PR   +      P   + NN     N+Y      + 
Sbjct: 55  VWEDQSDDVPNPNPYVYVLPPPSRPRTWAIPAGPYAPP--NYNNLPPKGNNY----GQLA 108

Query: 513 AEPVQNYFTPAQLLSSRNLPGIGLRYIVPVYAK 611
           +       T    L+++ +PG+G++Y   V  K
Sbjct: 109 SNSYSGGVTSVPGLAAQYVPGVGIKYTAIVSDK 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,376,377
Number of Sequences: 53049
Number of extensions: 499719
Number of successful extensions: 1010
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)