Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_O05
         (554 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110435-1|AAI10436.1|  862|Homo sapiens ZMIZ2 protein protein.        30   6.3  
BC021924-1|AAH21924.1|  442|Homo sapiens ZMIZ2 protein protein.        30   6.3  
AY426594-1|AAR85526.1|  893|Homo sapiens PIAS-like protein protein.    30   6.3  
AK090415-1|BAC03396.1|  925|Homo sapiens FLJ00315 protein protein.     30   6.3  
AC013436-2|AAP22368.1|  442|Homo sapiens unknown protein.              30   6.3  
AB067473-1|BAB67779.1|  655|Homo sapiens KIAA1886 protein protein.     30   6.3  

>BC110435-1|AAI10436.1|  862|Homo sapiens ZMIZ2 protein protein.
          Length = 862

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 544 QLASEP*ASSNNDGVLETTIEPLANAIPITVGDELLGKIPGSPAISIEDGIFETA 380
           QL   P   S   G+L+  + P  + I     +   G IPG+P  + EDG+ +TA
Sbjct: 481 QLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTA 535


>BC021924-1|AAH21924.1|  442|Homo sapiens ZMIZ2 protein protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 544 QLASEP*ASSNNDGVLETTIEPLANAIPITVGDELLGKIPGSPAISIEDGIFETA 380
           QL   P   S   G+L+  + P  + I     +   G IPG+P  + EDG+ +TA
Sbjct: 61  QLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTA 115


>AY426594-1|AAR85526.1|  893|Homo sapiens PIAS-like protein protein.
          Length = 893

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 544 QLASEP*ASSNNDGVLETTIEPLANAIPITVGDELLGKIPGSPAISIEDGIFETA 380
           QL   P   S   G+L+  + P  + I     +   G IPG+P  + EDG+ +TA
Sbjct: 512 QLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTA 566


>AK090415-1|BAC03396.1|  925|Homo sapiens FLJ00315 protein protein.
          Length = 925

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 544 QLASEP*ASSNNDGVLETTIEPLANAIPITVGDELLGKIPGSPAISIEDGIFETA 380
           QL   P   S   G+L+  + P  + I     +   G IPG+P  + EDG+ +TA
Sbjct: 544 QLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTA 598


>AC013436-2|AAP22368.1|  442|Homo sapiens unknown protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 544 QLASEP*ASSNNDGVLETTIEPLANAIPITVGDELLGKIPGSPAISIEDGIFETA 380
           QL   P   S   G+L+  + P  + I     +   G IPG+P  + EDG+ +TA
Sbjct: 61  QLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTA 115


>AB067473-1|BAB67779.1|  655|Homo sapiens KIAA1886 protein protein.
          Length = 655

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -2

Query: 544 QLASEP*ASSNNDGVLETTIEPLANAIPITVGDELLGKIPGSPAISIEDGIFETA 380
           QL   P   S   G+L+  + P  + I     +   G IPG+P  + EDG+ +TA
Sbjct: 274 QLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTA 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,210,208
Number of Sequences: 237096
Number of extensions: 1424765
Number of successful extensions: 5970
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5970
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)