Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_O03
         (515 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003235-1|AAO24991.1|  527|Drosophila melanogaster LP05663p pro...    28   8.6  
AY128499-1|AAM75092.1|  641|Drosophila melanogaster RH55123p pro...    28   8.6  
AE014297-2347|AAN13743.1|  494|Drosophila melanogaster CG5407-PB...    28   8.6  
AE014297-2346|AAF55415.2|  494|Drosophila melanogaster CG5407-PA...    28   8.6  

>BT003235-1|AAO24991.1|  527|Drosophila melanogaster LP05663p
           protein.
          Length = 527

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 220 HSI-VLHFLMRLQIEDPQMSKLQRAFGYLSNL 128
           H I +LH L RL ++  Q++ L R+ G+L NL
Sbjct: 411 HEIGLLHELQRLILQTNQITMLPRSIGHLGNL 442


>AY128499-1|AAM75092.1|  641|Drosophila melanogaster RH55123p
           protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 220 HSI-VLHFLMRLQIEDPQMSKLQRAFGYLSNL 128
           H I +LH L RL ++  Q++ L R+ G+L NL
Sbjct: 525 HEIGLLHELQRLILQTNQITMLPRSIGHLGNL 556


>AE014297-2347|AAN13743.1|  494|Drosophila melanogaster CG5407-PB,
           isoform B protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 220 HSI-VLHFLMRLQIEDPQMSKLQRAFGYLSNL 128
           H I +LH L RL ++  Q++ L R+ G+L NL
Sbjct: 378 HEIGLLHELQRLILQTNQITMLPRSIGHLGNL 409


>AE014297-2346|AAF55415.2|  494|Drosophila melanogaster CG5407-PA,
           isoform A protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 220 HSI-VLHFLMRLQIEDPQMSKLQRAFGYLSNL 128
           H I +LH L RL ++  Q++ L R+ G+L NL
Sbjct: 378 HEIGLLHELQRLILQTNQITMLPRSIGHLGNL 409


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,291,383
Number of Sequences: 53049
Number of extensions: 325988
Number of successful extensions: 671
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)