Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_O01
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M72421-1|AAA28715.1|  401|Drosophila melanogaster nanos protein.       81   2e-15
AE014297-2634|AAF55641.1|  401|Drosophila melanogaster CG5637-PA...    81   2e-15
AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA...    31   1.6  
AE014296-155|ABC66121.2|  355|Drosophila melanogaster CG34057-PA...    28   8.7  
AE014296-154|ABC66120.1|  344|Drosophila melanogaster CG34057-PB...    28   8.7  

>M72421-1|AAA28715.1|  401|Drosophila melanogaster nanos protein.
          Length = 401

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = +3

Query: 255 LPHECAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYCPENI 434
           +   C FC+NN E E +  SH+++D   RVLCP LR + CP CGA+G+ AHTIKYCP+  
Sbjct: 315 ISRHCVFCENNNEPEAVINSHSVRDNFNRVLCPKLRTYVCPICGASGDSAHTIKYCPKKP 374

Query: 435 EIGSERFVSRRRF 473
            I  E  +    F
Sbjct: 375 IITMEDAIKAESF 387


>AE014297-2634|AAF55641.1|  401|Drosophila melanogaster CG5637-PA
           protein.
          Length = 401

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = +3

Query: 255 LPHECAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYCPENI 434
           +   C FC+NN E E +  SH+++D   RVLCP LR + CP CGA+G+ AHTIKYCP+  
Sbjct: 315 ISRHCVFCENNNEPEAVINSHSVRDNFNRVLCPKLRTYVCPICGASGDSAHTIKYCPKKP 374

Query: 435 EIGSERFVSRRRF 473
            I  E  +    F
Sbjct: 375 IITMEDAIKAESF 387


>AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA
            protein.
          Length = 1765

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 378  KCGATGERAHTIKYCPENIEIGSERFVSRRRFPPSNSLIVGAT 506
            KC      AH  ++C  NI   +  F++R  F   N L VGAT
Sbjct: 1282 KCVCNNPWAHIGEFCETNINEKALTFINRESFLMRNYLSVGAT 1324


>AE014296-155|ABC66121.2|  355|Drosophila melanogaster CG34057-PA,
           isoform A protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 276 CKNNGENEDIYASHALKD 329
           CK NGE+ED+   H L+D
Sbjct: 227 CKLNGESEDVQIGHCLQD 244


>AE014296-154|ABC66120.1|  344|Drosophila melanogaster CG34057-PB,
           isoform B protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 276 CKNNGENEDIYASHALKD 329
           CK NGE+ED+   H L+D
Sbjct: 216 CKLNGESEDVQIGHCLQD 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,167,005
Number of Sequences: 53049
Number of extensions: 631928
Number of successful extensions: 1841
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)