Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_O01
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 36 0.030
U58758-15|AAB93424.1| 259|Caenorhabditis elegans Nanos related ... 30 1.5
U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81080-3|CAD30439.1| 608|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78419-5|CAB01703.1| 313|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 28 4.5
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23450-6|AAK31469.1| 790|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 28 6.0
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 27 7.9
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z46828-7|CAA86860.1| 311|Caenorhabditis elegans Hypothetical
protein R03D7.7 protein.
Length = 311
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +3
Query: 306 YASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKY 419
++ H K RGRV+CP LR+ C CGATG+ AHT K+
Sbjct: 267 WSDHCSKK-RGRVVCPKLRSMVCGICGATGDNAHTTKH 303
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 267 CAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYCPENIE 437
C C++ + +SH ++ G + C ++ C C ATGE+ H CP+ E
Sbjct: 700 CYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKKIKCGHCEATGEQGHHPLICPKKKE 756
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 267 CAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYCPENIE 437
C C++ + +SH ++ G + C ++ C C ATGE+ H CP+ E
Sbjct: 697 CYRCEHYQLPAEEVSSHNIRKDNGDLWCEHMKKIKCGHCEATGEQGHHPLICPKKKE 753
>U58758-15|AAB93424.1| 259|Caenorhabditis elegans Nanos related
protein 2 protein.
Length = 259
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 339 RVLCPVLRAFS-CPKCGATGERAHTIKYCP 425
R C L + + C CGA GE HT YCP
Sbjct: 183 RKKCDKLSSLAPCKICGARGEMNHTETYCP 212
>U41105-7|AAA82402.2| 184|Caenorhabditis elegans Hypothetical
protein T02G5.11 protein.
Length = 184
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 339 RVLCPVLRAFS-CPKCGATGERAHTIKYCP 425
R C L + + C CGA GE HT YCP
Sbjct: 108 RKKCDKLSSLAPCKICGARGEMNHTETYCP 137
>Z81080-3|CAD30439.1| 608|Caenorhabditis elegans Hypothetical
protein F39H2.5 protein.
Length = 608
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 440 YFDILRAVLDGVRTFSGSTTLRATESAQHRAQHSATKVFQSVRRVNIFILT 288
YFD+L V V T +GS TLR RAQ + + R +N+F +T
Sbjct: 27 YFDVLAQVHSVVETKNGSWTLRV-----WRAQKFGPEASKEKREMNLFHVT 72
>Z78419-5|CAB01703.1| 313|Caenorhabditis elegans Hypothetical
protein F26A3.5 protein.
Length = 313
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 480 SNSLIVGATTTTNGTGYDSIMPNTPASSP 566
S L++ AT T GYDS+ NTP+ SP
Sbjct: 174 SKKLVISATLT----GYDSVPINTPSKSP 198
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 168 HSIVPV*ASICSCLPMKCQNNNYRFVH*EC*GWNSSYVCY 49
H V A C KC + + H + GWN Y CY
Sbjct: 1154 HQFVAKNAKYCKKCTFKCVSQSNFIEHLDRHGWNQLYKCY 1193
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -1
Query: 168 HSIVPV*ASICSCLPMKCQNNNYRFVH*EC*GWNSSYVCY 49
H V A C KC + + H + GWN Y CY
Sbjct: 1154 HQFVAKNAKYCKKCTFKCVSQSNFIEHLDRHGWNQLYKCY 1193
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 375 PKCGATGERAHTIKYCPENIE---IGSERFVSRRRFPPSNSLIVGATTTTNGTGYDSIMP 545
PK G G+R IK+CP +E + + S R PP++ TT+ T + + P
Sbjct: 241 PK-GPPGDRGADIKFCPCPLELELLKGKHSKSVRPSPPASPSSTSQPTTSATTTSEPLSP 299
Query: 546 NT 551
+T
Sbjct: 300 ST 301
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 466 RRDTNLSEPISIFSGQYLMVCARSPVAPHFGQLKARSTGHSTRPRKSFKACDA 308
R +TN + + L R+PVA Q K + +G T+ + K CDA
Sbjct: 156 RIETNRMQNVQKHPETSLRRTTRTPVADQIHQWKTQLSGELTKSKIEQKTCDA 208
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 447 ERFVSRRRFPPSNSLIVGATTTTNGTGYDSIMPNTPASSPFTIVNCNLE*FPFE 608
E FV + G + N TG DS + TP S F C+L+ P+E
Sbjct: 343 EHFVYAANNNAFEQMFDGKSAPINLTGPDSAILPTPGHSIFPSAPCDLDILPWE 396
>U23450-6|AAK31469.1| 790|Caenorhabditis elegans Hypothetical
protein C30B5.5 protein.
Length = 790
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +1
Query: 244 CDALCLTSAPSVKTTVRMKIFTRRTL*KTFVAECCARCCALSVARSVVLPENVRTPSSTA 423
C + CL P T+R + RRT V C+R A SVA S+ PE+ R S
Sbjct: 241 CPSDCLCHVPLSSFTLR-GLAPRRT-----VVYDCSRGSASSVATSLTSPESFRISSRNE 294
Query: 424 LR 429
L+
Sbjct: 295 LK 296
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 447 ERFVSRRRFPPSNSLIVGATTTTNGTGYDSIMPNTPASSPFTIVNCNLE*FPFE 608
E FV + G + N TG DS + TP S F C+L+ P+E
Sbjct: 343 EHFVYAANNNAFEQMFDGKSAPINLTGPDSAILPTPGHSIFPSAPCDLDILPWE 396
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 261 HECAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAH 407
++C CK + YA+ R L + + CPKCGA+ R +
Sbjct: 209 YQCQLCKKSISRHGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRY 257
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 261 HECAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAH 407
++C CK + YA+ R L + + CPKCGA+ R +
Sbjct: 209 YQCQLCKKSISRHGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRY 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,711,390
Number of Sequences: 27780
Number of extensions: 317171
Number of successful extensions: 905
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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