Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_O01
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              94   8e-22
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    24   1.0  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    24   1.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.3  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    23   3.1  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    23   3.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   5.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   5.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   5.4  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   9.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.4  

>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 94.3 bits (224), Expect = 8e-22
 Identities = 38/58 (65%), Positives = 44/58 (75%)
 Frame = +3

Query: 255 LPHECAFCKNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYCPE 428
           LP EC FC+NNGE E  Y  H LKD  GRV CPVLRA++CP CGA G+ AHT+KYCP+
Sbjct: 36  LPTECVFCRNNGEEEAYYRKHLLKDADGRVSCPVLRAYTCPICGACGDIAHTVKYCPK 93


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
 Frame = +3

Query: 261 HECAFCKNNGENEDIYASHAL---KDFRGRVLCPVL-RAFSCPKCGA------TGERAHT 410
           ++C  C+   + +++Y SH     K+      C +  + F+ P          TGE+ + 
Sbjct: 62  YQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQ 121

Query: 411 IKYCPENIEIGSERFVSRR 467
            +YC ++  +     V RR
Sbjct: 122 CEYCSKSFSVKENLSVHRR 140


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 127 QTTTYRCSHGNN*VYFVLFAQACYMSSCRK*LGCAVKEEC 246
           +   Y+C +GNN    +   + C     +K L   ++ EC
Sbjct: 217 KNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPEC 256


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 127 QTTTYRCSHGNN*VYFVLFAQACYMSSCRK*LGCAVKEEC 246
           +   Y+C +GNN    +   + C     +K L   ++ EC
Sbjct: 14  KNAVYQCKYGNNCEIDMYMRRKCQECRLKKCLTVGMRPEC 53


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 506 YYNQRYWL*FHHAQYSSFLPIYHR*LQ 586
           Y  ++ WL  H A+  S   +YH+ LQ
Sbjct: 724 YPRRKEWLYLHRARSESEFEMYHQQLQ 750


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
          protein.
          Length = 116

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 9  SDSASNIDVDEILYNIRMRS 68
          SD    +++DEIL N R+R+
Sbjct: 24 SDKYDYVNIDEILANDRLRN 43


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
          protein.
          Length = 116

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 9  SDSASNIDVDEILYNIRMRS 68
          SD    +++DEIL N R+R+
Sbjct: 24 SDKYDYVNIDEILANDRLRN 43


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 279 KNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYC 422
           K++G NE     H     R   +CP + +    K G T   +HT   C
Sbjct: 42  KSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSC 89


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 279 KNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYC 422
           K++G NE     H     R   +CP + +    K G T   +HT   C
Sbjct: 47  KSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSC 94


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 279 KNNGENEDIYASHALKDFRGRVLCPVLRAFSCPKCGATGERAHTIKYC 422
           K++G NE     H     R   +CP + +    K G T   +HT   C
Sbjct: 47  KSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSC 94


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 342 LGHESLSKRATRKYLHSHRCF 280
           L  E +S+   +KYL ++ CF
Sbjct: 58  LQEEDISEGNIKKYLTNYSCF 78


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 547  ILQLPPHLPSLTAT 588
            I+  PPH P +T T
Sbjct: 1362 IVHAPPHSPQITLT 1375


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 408 TIKYCPENIEIGSER 452
           T  +CP N+ + SER
Sbjct: 308 TTLFCPPNLRLTSER 322


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 408 TIKYCPENIEIGSER 452
           T  +CP N+ + SER
Sbjct: 398 TTLFCPPNLRLTSER 412


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,458
Number of Sequences: 438
Number of extensions: 4320
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)