Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N20
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002905-1|AAH02905.1| 396|Homo sapiens coiled-coil domain cont... 251 2e-66
AF250306-1|AAK37425.1| 396|Homo sapiens putative SB115 protein ... 251 2e-66
BC019096-1|AAH19096.1| 323|Homo sapiens coiled-coil domain cont... 72 1e-12
BC000561-1|AAH00561.1| 323|Homo sapiens coiled-coil domain cont... 72 1e-12
AK023988-1|BAB14757.1| 323|Homo sapiens protein ( Homo sapiens ... 72 1e-12
AK001236-1|BAA91572.1| 323|Homo sapiens protein ( Homo sapiens ... 72 1e-12
AF091080-1|AAC72949.1| 316|Homo sapiens unknown protein. 72 1e-12
AC005578-3|AAC33489.1| 41|Homo sapiens F20887_2, partial CDS p... 32 1.8
AB040799-1|BAA96645.1| 375|Homo sapiens SREB1 protein. 31 2.3
>BC002905-1|AAH02905.1| 396|Homo sapiens coiled-coil domain
containing 130 protein.
Length = 396
Score = 251 bits (614), Expect = 2e-66
Identities = 112/181 (61%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDP-KVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCN 229
MGERKG N YYPPD++P K G LN++ +H LRERARKL GILIIRFEMPYNIWC+GC
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 230 NHIGMGVRYNAEKKKVGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQEN 409
NHIGMGVRYNAEKKKVG YYTTP+Y+FRMKCHLC N+ E++TDP N DYVIVSGA+R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120
Query: 410 RWDPTENGQIVPETKETQKRLFDDAMFKLEHKKGDEDGSKLDKPRLGKLVGRNETVWKDD 589
RWD +N Q++ E +++L DAMF+LEH + D K P L + ++ WKDD
Sbjct: 121 RWDMADNEQVLTTEHEKKQKLETDAMFRLEHGEADRSTLKKALPTLSH-IQEAQSAWKDD 179
Query: 590 Y 592
+
Sbjct: 180 F 180
>AF250306-1|AAK37425.1| 396|Homo sapiens putative SB115 protein
protein.
Length = 396
Score = 251 bits (614), Expect = 2e-66
Identities = 112/181 (61%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDP-KVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCN 229
MGERKG N YYPPD++P K G LN++ +H LRERARKL GILIIRFEMPYNIWC+GC
Sbjct: 1 MGERKGVNKYYPPDFNPEKHGSLNRYHNSHPLRERARKLSQGILIIRFEMPYNIWCDGCK 60
Query: 230 NHIGMGVRYNAEKKKVGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQEN 409
NHIGMGVRYNAEKKKVG YYTTP+Y+FRMKCHLC N+ E++TDP N DYVIVSGA+R+E
Sbjct: 61 NHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEE 120
Query: 410 RWDPTENGQIVPETKETQKRLFDDAMFKLEHKKGDEDGSKLDKPRLGKLVGRNETVWKDD 589
RWD +N Q++ E +++L DAMF+LEH + D K P L + ++ WKDD
Sbjct: 121 RWDMADNEQVLTTEHEKKQKLETDAMFRLEHGEADRSTLKKALPTLSH-IQEAQSAWKDD 179
Query: 590 Y 592
+
Sbjct: 180 F 180
>BC019096-1|AAH19096.1| 323|Homo sapiens coiled-coil domain
containing 94 protein.
Length = 323
Score = 72.1 bits (169), Expect = 1e-12
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDPKVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCNN 232
M ERK N YYPPD+DP +K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 233 HIGMGVRYNAEKKKVG--MYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 400
+I G ++NA K+ V +Y P+++F +KC C KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATR 106
>BC000561-1|AAH00561.1| 323|Homo sapiens coiled-coil domain
containing 94 protein.
Length = 323
Score = 72.1 bits (169), Expect = 1e-12
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDPKVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCNN 232
M ERK N YYPPD+DP +K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 233 HIGMGVRYNAEKKKVG--MYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 400
+I G ++NA K+ V +Y P+++F +KC C KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATR 106
>AK023988-1|BAB14757.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ13926 fis, clone Y79AA1000589, weakly similar to
32.3 KD PROTEIN IN CWP1-MBR1 INTERGENIC REGION. ).
Length = 323
Score = 72.1 bits (169), Expect = 1e-12
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDPKVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCNN 232
M ERK N YYPPD+DP +K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 233 HIGMGVRYNAEKKKVG--MYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 400
+I G ++NA K+ V +Y P+++F +KC C KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATR 106
>AK001236-1|BAA91572.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ10374 fis, clone NT2RM2001936, weakly similar to
32.3 KD PROTEIN IN CWP1-MBR1 INTERGENIC REGION. ).
Length = 323
Score = 72.1 bits (169), Expect = 1e-12
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDPKVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCNN 232
M ERK N YYPPD+DP +K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 233 HIGMGVRYNAEKKKVG--MYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 400
+I G ++NA K+ V +Y P+++F +KC C KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGAAR 106
>AF091080-1|AAC72949.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 72.1 bits (169), Expect = 1e-12
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDPKVGGLNKFLGTHALRERARKLHMGILIIRFEMPYNIWCEGCNN 232
M ERK N YYPPD+DP +K ++R ++R P+N+ C+ C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPKLKLPKDRQ-------YVVRLMAPFNMRCKTCGE 48
Query: 233 HIGMGVRYNAEKKKVG--MYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 400
+I G ++NA K+ V +Y P+++F +KC C KTDP N DY + GA R
Sbjct: 49 YIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATR 106
>AC005578-3|AAC33489.1| 41|Homo sapiens F20887_2, partial CDS
protein.
Length = 41
Score = 31.9 bits (69), Expect = 1.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 53 MGERKGQNLYYPPDYDP 103
M ERK N YYPPD+DP
Sbjct: 1 MSERKVLNKYYPPDFDP 17
>AB040799-1|BAA96645.1| 375|Homo sapiens SREB1 protein.
Length = 375
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 273 KLGCTTLHLCINLE*NVIYVITILR*R-LIRGTW--TMSLCLEQGDRRIGGIPLKM 431
KL +L LC++L NV++ + I+R R L R + + LCL G R + +P M
Sbjct: 21 KLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALACLPAVM 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,362,109
Number of Sequences: 237096
Number of extensions: 2378903
Number of successful extensions: 9504
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9496
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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