Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N19
(531 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 71 6e-13
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 43 1e-04
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 37 0.009
12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 36 0.020
07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299 33 0.19
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 29 1.8
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 29 1.8
01_05_0733 - 24707753-24707819,24708906-24709723 29 1.8
03_06_0776 - 36176390-36177589 29 3.1
02_02_0545 - 11376016-11378307 29 3.1
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 28 4.1
04_04_0441 - 25226870-25228327 28 4.1
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 28 4.1
09_03_0143 - 12723640-12723935,12723959-12724310 28 5.4
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 28 5.4
07_03_0604 + 19903654-19904598 28 5.4
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 28 5.4
03_02_0935 - 12517564-12517650,12517995-12518060,12518156-125181... 28 5.4
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 28 5.4
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 28 5.4
12_01_0387 - 3028922-3029689,3032116-3032832 27 7.1
11_06_0445 - 23679918-23680282,23680415-23683349 27 7.1
06_02_0005 + 10502478-10503446 27 7.1
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 27 9.4
03_02_0869 - 11944309-11945004,11945522-11945838,11945933-11946098 27 9.4
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 70.9 bits (166), Expect = 6e-13
Identities = 48/135 (35%), Positives = 69/135 (51%)
Frame = -3
Query: 523 LAHLAQRMARFKKGGIPDQEAAARILLNDWNTGKVRYFTEPPETPDSEIHVDAKIVTAMA 344
L +A + KKGGI D EAAARI+L+DWN GK+ YFT PP+ D+ DA I++
Sbjct: 381 LQKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYFTVPPKR-DAVDDSDAVIISETG 439
Query: 343 EEFDINTFEAMETEAINALDTKPDDSDGIMITSTGPVTASAESEMQVDEDGSSLLPKNVN 164
+EF+I+ E+ I L + ++ I I S P + EM D + + +
Sbjct: 440 KEFNIDEIYKAESSYIGGLKSL-EEFRHIEIPSNAP--PQIDEEMLEDGKKQNEPAQENH 496
Query: 163 IRSKLDKNKRVNEKT 119
S D N+R KT
Sbjct: 497 DESMSDANEREGAKT 511
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 523 LAHLAQRMARFKKGGIPDQEAAARILLNDWNTGKVRYFTEPPETPDSEIHVDAKIVTAMA 344
L L++ + +GG PD A+++L+DW GK+ +F PP+ + A+ V
Sbjct: 428 LVQLSKTTGKLLRGGEPDLTTTAKMVLHDWQRGKIPFFVPPPQQGEDSPSETAEPVEKSD 487
Query: 343 EE 338
EE
Sbjct: 488 EE 489
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -3
Query: 481 GIPDQEAAARILLNDWNTGKVRYFTEPPETPDSE 380
G+PD+ AAR +L D+ GK+ +F PP DSE
Sbjct: 468 GLPDETRAARQILKDYLDGKIPHFELPPGDTDSE 501
>12_02_1133 -
26368323-26369457,26369556-26369635,26370145-26370201,
26370508-26370601,26371006-26371092,26371179-26371268,
26371396-26371649
Length = 598
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -3
Query: 520 AHLAQRMARFKKGGIPDQEAAARILLNDWNTGKVRYFTEPPETPDSE 380
A+ A R G+PD+ AAR +L D+ GK+ +F PP D+E
Sbjct: 439 AYCASR-GHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGMVDTE 484
>07_03_0552 + 19383475-19383559,19383807-19385129,19385211-19385299
Length = 498
Score = 32.7 bits (71), Expect = 0.19
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 216 LSAEAVTGPVLVIMIPS-ESSGLVSSALMASVSIASKVLM---SNSSAMAVTIFASTCIS 383
LSA A +G ++ +P+ E L SS AS +A +VL +NSS + I A
Sbjct: 84 LSALASSGARAIVGVPNDELLALGSSPATASAWVARRVLPYAGANSSTPGL-IAAIAVGD 142
Query: 384 EXXXXXXXXK*RTLPVFQSLRSILAAASWSGIP 482
E LP QSL + LAAA+ S IP
Sbjct: 143 EVPTALPSALPVLLPAIQSLAAALAAANLSSIP 175
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 29.5 bits (63), Expect = 1.8
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 8/151 (5%)
Frame = -3
Query: 511 AQRMARFKKGGIPDQEA-AARILLNDWNTGKVRYFTEPPETPDSEIHV-------DAKIV 356
A+ A K G Q+A A + N G+V+ TE +T E + D K
Sbjct: 3836 ARESAEVAKEGTGQQKADQASVQSPQDNMGQVKE-TEEQDTGTGETYQASVQSPQDIKEQ 3894
Query: 355 TAMAEEFDINTFEAMETEAINALDTKPDDSDGIMITSTGPVTASAESEMQVDEDGSSLLP 176
E+ D T EA + A D P D T P S++ E ++ ED +LLP
Sbjct: 3895 RDETEQQDTRTGEAYQDAP--APDA-PQDKGSPRSTQPPPPVESSQKESKIAEDSQTLLP 3951
Query: 175 KNVNIRSKLDKNKRVNEKTKIDPEMQLEGNS 83
+ ++ + E T P ++ +G++
Sbjct: 3952 QASAVQESTPSSAGPRESTPY-PSVEDQGSA 3981
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 230 RHRSSTCDHDSV*IVRFSVECVNGFSFHRFEGVDVKFLRHGG 355
R R S+C+ + V + E VN F F G+ +K RHGG
Sbjct: 852 RQRVSSCEVEGNDGVFSTQESVNVFDFRVPAGIGLKMARHGG 893
>01_05_0733 - 24707753-24707819,24708906-24709723
Length = 294
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = -3
Query: 391 PDSEIHVDAKIVTAMAEEFDINTFEAMETEAINALDTKPDDSDGIMITSTGPVTASAESE 212
P ++ V+ + +A+ F INTF+AME + + A D + GP+ S SE
Sbjct: 195 PVYQLMVELGLDYLLADGFLINTFDAMEHDTLVAFKELSDKGVYPPAYAVGPLVRSPTSE 254
Query: 211 MQVD 200
D
Sbjct: 255 AAND 258
>03_06_0776 - 36176390-36177589
Length = 399
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 367 AKIVTAMAEEFDINTFEAMETEAINALDTKPDDSDGIMITSTGPVTASAESEMQVDEDGS 188
A +VT AE + + ++ E I+ D+ DD D IM +T A S M D+DG
Sbjct: 252 AMVVTVDAELPNPKSMVTVDVELIS--DSSDDDDDDIMSLPGQQITKVASS-MSDDDDGE 308
Query: 187 S 185
S
Sbjct: 309 S 309
>02_02_0545 - 11376016-11378307
Length = 763
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 90 PSSCISGSIFVFSLTLLFLSNFDLILTFLGSKLDPSSSTCISL---SAEAVTGPVLVIMI 260
P+ C G + L +LF S +L FLGS SSS + L A V+ PV I
Sbjct: 25 PAGCNLGLLARIELLVLFCSAILALLVFLGSSRRRSSSATVRLVVWGAFTVSYPVAAYTI 84
Query: 261 P-SESSGLVSSALMASVSIASKVLMSNSSAMAVTI 362
+SS + VL S+ S A T+
Sbjct: 85 GLMQSSPFHHELFVVWSCFFLFVLASSDSITAYTL 119
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = -3
Query: 406 EPPETPDSEIHVDAKIVTAMAE----EFDINTFEAMETEAINALDT-----KPDDSDGIM 254
E E EI D+ V A+ E D E +E + A D+ KPD+ + +
Sbjct: 579 EASEASAQEIIEDSTTVEGAADDQTVESDSPPPEGVELSSNGAPDSSIAEDKPDEPEESL 638
Query: 253 ITSTGPVTASAESE 212
I PVTAS+ESE
Sbjct: 639 IVEEVPVTASSESE 652
>04_04_0441 - 25226870-25228327
Length = 485
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 331 INTFEAMETEAINALDTKPDDSDGIMITSTGPVTASAESEMQVDEDGSSLL 179
+NT + +ET ++ L S G+ + GP+ A+ + D+D +S++
Sbjct: 220 VNTIQELETSGLDMLRA----SFGVQTWAIGPILAAPDPSKSQDDDDTSII 266
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -3
Query: 481 GIPDQEAAARILLNDWNTGKVRYFTEPPETPDSEIHVDAKIVTAMAEE 338
G P++ AAA ++L + ++ PP P ++ H DA V E
Sbjct: 138 GFPEKAAAAAVVLRGEDFPSLKASVAPPPPPPAQRHKDADGVRVATPE 185
>09_03_0143 - 12723640-12723935,12723959-12724310
Length = 215
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 379 IHVDAKIVTAMAEEFDINTFEAMETEAINALD 284
I +DAK+ A+A D+NTF AME I D
Sbjct: 106 IEMDAKMANAIA---DVNTFHAMEAHYIEHWD 134
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 153 FDLILTFLGSKLDPSSSTCISLSAEAVTGP 242
+D+ T+ GS + PS +TC +S+ A T P
Sbjct: 28 YDIFATY-GSPIPPSPTTCYPVSSAAPTAP 56
>07_03_0604 + 19903654-19904598
Length = 314
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 153 FDLILTFLGSKLDPSSSTCISLSAEAVTG 239
FD T+L S+LDP C+ L+ G
Sbjct: 53 FDAARTYLASRLDPRDVRCLGLTVSKAPG 81
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -3
Query: 310 ETEAINALDTKPDDSDGIMITSTGPVTASA----ESEMQVDEDGSSLLPKNVNIRSKLDK 143
E+ A++AL T D S I+ S+ + S+ + D D +P V++ K DK
Sbjct: 477 ESSALDALHTLADLSVNILQPSSIVESESSAQIKDENKDNDSDEKPSMPAAVSVLEKKDK 536
Query: 142 NKRVNEKTKIDPEM 101
+K +K K E+
Sbjct: 537 SKSTVKKVKRQSEL 550
>03_02_0935 -
12517564-12517650,12517995-12518060,12518156-12518185,
12518279-12518377,12518578-12518673,12519221-12519271,
12519358-12519424,12519516-12519610,12519928-12520009,
12520609-12520658,12520741-12520791,12521749-12521832,
12521918-12522028,12522276-12522425,12522858-12522975,
12523118-12523290
Length = 469
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Frame = -3
Query: 370 DAKIVTAMAEEFDI------NTFEAMETE--------AINALDTK-PDDSDGIMITSTGP 236
D KI A+AEE ++ N FEA+ A+N + ++ I + +GP
Sbjct: 248 DVKIAAAVAEETELPFVTAENKFEALAAHDAFVESSGAVNTISASLMKIANDIRLLGSGP 307
Query: 235 VTASAESEMQVDEDGSSLLPKNVN 164
E + +E GSS++P VN
Sbjct: 308 RCGLGELILPENEPGSSIMPGKVN 331
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 286 DTKPDDSDGIMITSTGPVTASAESEMQVDE---DGSSLLPKNVNIRSK 152
D+K D DG T + A+ +MQ +E DG++ +V +++K
Sbjct: 313 DSKVDTKDGSSATQEPAIDANRPGKMQTEETEVDGTNSFTSSVKVKAK 360
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 IMIPSESSGLVSSALMASVSIASKVL--MSNSSAMAVTIFASTCISEXXXXXXXXK*RTL 425
I P + + LV + S+ SK + MSNS A + + + +
Sbjct: 872 IPTPKQPAPLVDK--VTSLDPVSKQMSSMSNSEAREAILPKKAAVLSVSQTPAISRPSSA 929
Query: 426 PVFQSLRSILAAASWSGIPPFLNRAILCA 512
P+FQ RS L +PP L+R++ A
Sbjct: 930 PLFQVPRSTLPPTPAVQVPPMLSRSMTLA 958
>12_01_0387 - 3028922-3029689,3032116-3032832
Length = 494
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 283 TKPDDSDGIMITSTGPVTASAES 215
+KPDDS GI ++S+ P A++ S
Sbjct: 293 SKPDDSAGIGMSSSSPAVAASRS 315
>11_06_0445 - 23679918-23680282,23680415-23683349
Length = 1099
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 102 ISGSIFVFSLTLLFLSNFDLILTFLGSKLDPSSSTCISLSAEAVTGPVLVIMIPSESSGL 281
+SG+I FS T L L L ++ ++ S +SLS ++G L IP ES G
Sbjct: 252 LSGTIPPFSKTSLVLRYLCLTNNYISGEIPNSIDNILSLSKLMLSGNNLEGTIP-ESLGK 310
Query: 282 VSSALMASVS 311
+S+ + +S
Sbjct: 311 LSNLQLLDLS 320
>06_02_0005 + 10502478-10503446
Length = 322
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 331 INTFEAMETEAINALDTKPDDSDGIMITSTGPVTASAESEMQVDEDGSSLL 179
INTF+A+E A+ AL + + GP ++ A + D D SS L
Sbjct: 66 INTFDALEPVALAALRDGTVVRGFPPVFAVGPYSSLASEKKAADADQSSAL 116
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 495 GSKKAESRTKKQPPGYFST 439
G KKA +TKKQPP + S+
Sbjct: 207 GQKKAPKKTKKQPPLFSSS 225
>03_02_0869 - 11944309-11945004,11945522-11945838,11945933-11946098
Length = 392
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +3
Query: 186 LDPSSSTCISLSAEAVTGPVLVIMIPSESSGLVSSALMASVSIASKVLMSNSSAMAVT 359
LDPSSS S SA AV P V SS + A A+ N S + T
Sbjct: 308 LDPSSSAAASTSAGAVVEPPAVTGKRKRSSDGGEPTIQALPPAAAAAKKPNGSCVGAT 365
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,768,913
Number of Sequences: 37544
Number of extensions: 220858
Number of successful extensions: 792
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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