Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_N18
         (529 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   0.36 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     25   0.36 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   1.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   5.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   5.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   5.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   5.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 315 VSPTIRYQYMYSPYESHKTYQLQAPQYSQPE 407
           +SP     Y YSP  SH  Y +   Q+S P+
Sbjct: 261 LSPVTNNLY-YSPLLSHGLYYVDTEQFSNPQ 290


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = +3

Query: 222 VASSDAFFLKWGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQY 395
           + S  +F   +   +  P SQ T +Q L P VSP       Y  Y         +PQY
Sbjct: 386 IGSGGSFPSLYPMATTSPQSQST-IQTLRPQVSPDRTSPMEYRLYNPALIQSQPSPQY 442



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 262 SDPHFKKKASDDATIAKIT 206
           SDP F KKA  D  I K++
Sbjct: 211 SDPIFDKKAMSDLVICKLS 229


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 262 SDPHFKKKASDDATIAKIT 206
           SDP F KKA  D  I K++
Sbjct: 211 SDPIFDKKAMSDLVICKLS 229


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/48 (20%), Positives = 19/48 (39%)
 Frame = +3

Query: 309 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 452
           P +  ++   Y YS Y ++         Y + +      +  IPI +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/48 (20%), Positives = 19/48 (39%)
 Frame = +3

Query: 309 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 452
           P +  ++   Y YS Y ++         Y + +      +  IPI +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/48 (20%), Positives = 19/48 (39%)
 Frame = +3

Query: 309 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 452
           P +  ++   Y YS Y ++         Y + +      +  IPI +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/48 (20%), Positives = 19/48 (39%)
 Frame = +3

Query: 309 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 452
           P +  ++   Y YS Y ++         Y + +      +  IPI +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 216 AIVASSDAFFLKWGSDSAPPSSQKTWVQPLSP 311
           A + S+   +   GS S  PSS  ++   +SP
Sbjct: 74  AAITSTSPSYPGGGSSSPSPSSPSSFFSSVSP 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,664
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)