Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N16
(394 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 239 2e-63
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 239 2e-63
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 239 2e-63
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 239 2e-63
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 180 2e-45
BC022401-1|AAH22401.1| 317|Homo sapiens OR51E1 protein protein. 28 9.5
AY775731-1|AAV54110.1| 317|Homo sapiens prostate overexpressed ... 28 9.5
AY698056-1|AAU07996.1| 318|Homo sapiens Dresden-G-protein-coupl... 28 9.5
AF521131-1|AAM80488.1| 354|Homo sapiens platelet receptor for t... 28 9.5
AB065787-1|BAC06006.1| 317|Homo sapiens seven transmembrane hel... 28 9.5
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 239 bits (585), Expect = 2e-63
Identities = 108/127 (85%), Positives = 114/127 (89%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
D GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D TP RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 374 LGRKKGA 394
LGRKKGA
Sbjct: 121 LGRKKGA 127
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 239 bits (585), Expect = 2e-63
Identities = 108/127 (85%), Positives = 114/127 (89%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
D GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D TP RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 374 LGRKKGA 394
LGRKKGA
Sbjct: 121 LGRKKGA 127
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 239 bits (585), Expect = 2e-63
Identities = 108/127 (85%), Positives = 114/127 (89%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
D GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D TP RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 374 LGRKKGA 394
LGRKKGA
Sbjct: 121 LGRKKGA 127
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 239 bits (585), Expect = 2e-63
Identities = 108/127 (85%), Positives = 114/127 (89%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
D GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D TP RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 374 LGRKKGA 394
LGRKKGA
Sbjct: 121 LGRKKGA 127
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 180 bits (438), Expect = 2e-45
Identities = 92/127 (72%), Positives = 97/127 (76%)
Frame = +2
Query: 14 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
MGISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGG
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG--------- 51
Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D TP RQWYESHY LP
Sbjct: 52 ----------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 100
Query: 374 LGRKKGA 394
LGRKKGA
Sbjct: 101 LGRKKGA 107
>BC022401-1|AAH22401.1| 317|Homo sapiens OR51E1 protein protein.
Length = 317
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 378 PSGSR*WLSYHCLLGVPSTTTIAFFTKVLVRTNSLLEAL*TTSIIRVLRVEHS 220
P+G+ +Y L+G+P F+ + + L+ L +II ++R EHS
Sbjct: 4 PNGNESSATYFILIGLPGLEEAQFWLAFPLCSLYLIAVLGNLTIIYIVRTEHS 56
>AY775731-1|AAV54110.1| 317|Homo sapiens prostate overexpressed G
protein-coupled receptor protein.
Length = 317
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 378 PSGSR*WLSYHCLLGVPSTTTIAFFTKVLVRTNSLLEAL*TTSIIRVLRVEHS 220
P+G+ +Y L+G+P F+ + + L+ L +II ++R EHS
Sbjct: 4 PNGNESSATYFILIGLPGLEEAQFWLAFPLCSLYLIAVLGNLTIIYIVRTEHS 56
>AY698056-1|AAU07996.1| 318|Homo sapiens Dresden-G-protein-coupled
receptor protein.
Length = 318
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 378 PSGSR*WLSYHCLLGVPSTTTIAFFTKVLVRTNSLLEAL*TTSIIRVLRVEHS 220
P+G+ +Y L+G+P F+ + + L+ L +II ++R EHS
Sbjct: 5 PNGNESSATYFILIGLPGLEEAQFWLAFPLCSLYLIAVLGNLTIIYIVRTEHS 57
>AF521131-1|AAM80488.1| 354|Homo sapiens platelet receptor for type
III collagen protein.
Length = 354
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 KMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRI-HLVRSRGGNTK 175
+ +SRDH H A R ++KK+K EL T + RI ++ SR N K
Sbjct: 43 RFAVSRDHCHCTLAWKTARLHLKKKKKKELNL-VYTTVMNTNRIFKMIFSRVANVK 97
>AB065787-1|BAC06006.1| 317|Homo sapiens seven transmembrane helix
receptor protein.
Length = 317
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 378 PSGSR*WLSYHCLLGVPSTTTIAFFTKVLVRTNSLLEAL*TTSIIRVLRVEHS 220
P+G+ +Y L+G+P F+ + + L+ L +II ++R EHS
Sbjct: 4 PNGNESSATYFILIGLPGLEEAQFWLAFPLCSLYLIAVLGNLTIIYIVRTEHS 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,767,951
Number of Sequences: 237096
Number of extensions: 1580592
Number of successful extensions: 2947
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2947
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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