Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_N16
         (394 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p pro...   215   2e-56
AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p pro...   215   2e-56
AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC...   215   2e-56
AY119248-1|AAM51108.1|  317|Drosophila melanogaster SD21096p pro...    27   8.9  
AE014297-3918|AAF56565.1|  317|Drosophila melanogaster CG14544-P...    27   8.9  

>AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p
           protein.
          Length = 208

 Score =  215 bits (525), Expect = 2e-56
 Identities = 100/125 (80%), Positives = 110/125 (88%)
 Frame = +2

Query: 14  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
           MGISRD  HKRRATGGKR  +RKKRK+ELGRPAANTKLG  R+H VR+RGGNTK RALRL
Sbjct: 1   MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60

Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
           +TGNFAW SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+D TP RQWYE+HY+LP
Sbjct: 61  ETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLP 120

Query: 374 LGRKK 388
           LGRK+
Sbjct: 121 LGRKR 125


>AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p
           protein.
          Length = 208

 Score =  215 bits (525), Expect = 2e-56
 Identities = 100/125 (80%), Positives = 110/125 (88%)
 Frame = +2

Query: 14  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
           MGISRD  HKRRATGGKR  +RKKRK+ELGRPAANTKLG  R+H VR+RGGNTK RALRL
Sbjct: 1   MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60

Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
           +TGNFAW SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+D TP RQWYE+HY+LP
Sbjct: 61  ETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLP 120

Query: 374 LGRKK 388
           LGRK+
Sbjct: 121 LGRKR 125


>AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC
           protein.
          Length = 208

 Score =  215 bits (525), Expect = 2e-56
 Identities = 100/125 (80%), Positives = 110/125 (88%)
 Frame = +2

Query: 14  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 193
           MGISRD  HKRRATGGKR  +RKKRK+ELGRPAANTKLG  R+H VR+RGGNTK RALRL
Sbjct: 1   MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60

Query: 194 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDGTPSRQWYESHYLLP 373
           +TGNFAW SE   RKTRI DVVYNASNNELVRTKTLVKN+IVV+D TP RQWYE+HY+LP
Sbjct: 61  ETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLP 120

Query: 374 LGRKK 388
           LGRK+
Sbjct: 121 LGRKR 125


>AY119248-1|AAM51108.1|  317|Drosophila melanogaster SD21096p
           protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 176 YRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
           ++AL+L  G F   S C  +  R I  +     NE+V  + L +  +V
Sbjct: 203 FKALKLSGGRFCSFSPCIEQSQRCIQELTKLGFNEIVSLEVLQQENVV 250


>AE014297-3918|AAF56565.1|  317|Drosophila melanogaster CG14544-PA
           protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 176 YRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 319
           ++AL+L  G F   S C  +  R I  +     NE+V  + L +  +V
Sbjct: 203 FKALKLSGGRFCSFSPCIEQSQRCIQELTKLGFNEIVSLEVLQQENVV 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,759,474
Number of Sequences: 53049
Number of extensions: 454064
Number of successful extensions: 977
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)