Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N15
(523 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 113 8e-26
02_04_0017 + 18937774-18937864,18938505-18940945 112 1e-25
04_01_0103 + 1082077-1082167,1083037-1085477 112 2e-25
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 106 9e-24
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 83 2e-16
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 55 3e-08
03_05_0511 + 25056018-25059107 48 3e-06
02_04_0148 - 20198407-20201424 46 2e-05
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 31 0.56
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 29 1.7
06_03_0637 - 22995831-22996667,22997200-22997694 29 2.3
01_07_0331 + 42804385-42804659,42806175-42806340,42806424-428065... 29 2.3
01_06_0364 - 28749825-28750053,28750442-28750621,28751018-287511... 29 3.0
11_06_0114 - 20284840-20284844,20285280-20285402,20285504-20287937 28 4.0
05_01_0187 + 1349725-1352238 28 4.0
08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 28 5.2
01_06_0425 + 29264714-29266135 28 5.2
01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391 28 5.2
04_04_1199 + 31684441-31684884 27 6.9
03_06_0490 + 34289904-34289967,34291912-34292237,34292401-342925... 27 6.9
12_02_0886 + 24014478-24014565,24014929-24015413 27 9.1
11_06_0252 - 21713955-21714473 27 9.1
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 27 9.1
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 113 bits (272), Expect = 8e-26
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Frame = +3
Query: 12 YQTFQRIVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 191
YQTF R++EN NVI+ATY D +G+V+V P KG+V F +GLHGWAFTL F++MYA K
Sbjct: 175 YQTFSRVIENANVIMATYED--ALLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASK 232
Query: 192 FKIDLVKLMNRLWGENFFNANSKPYVVV---QETRKRKGLKEGLPDLNQYLDTL*N 350
F +D K+M RLWGEN+F+ +K + + +T KR ++ + Q ++T N
Sbjct: 233 FGVDESKMMERLWGENYFDPTTKKWTIKHTGSDTCKRGFIQFCYEPIRQIINTCMN 288
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 112 bits (270), Expect = 1e-25
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +3
Query: 12 YQTFQRIVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 191
YQTF R++EN NVI+ATY D +G+V+V P KG+V F +GLHGWAFTL F++MYA K
Sbjct: 175 YQTFSRVIENANVIMATYEDTL--LGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASK 232
Query: 192 FKIDLVKLMNRLWGENFFNANSKPY 266
F +D K+M RLWGENFF+ +K +
Sbjct: 233 FGVDEFKMMERLWGENFFDPATKKW 257
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 249 ANSKPYVVVQETRKRKGLKEGLPDLNQYLDTL 344
A S+ +VQ+ RKRKGLKE + L+ + D L
Sbjct: 812 AGSQASTLVQDIRKRKGLKEQMTPLSDFEDKL 843
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 112 bits (269), Expect = 2e-25
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +3
Query: 12 YQTFQRIVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 191
YQTF R++EN NVI+ATY D +G+V+V P KG+V F +GLHGWAFTL F++MYA K
Sbjct: 175 YQTFSRVIENANVIMATYEDTL--LGDVQVYPEKGTVAFSAGLHGWAFTLSSFAKMYASK 232
Query: 192 FKIDLVKLMNRLWGENFFNANSKPY 266
F +D K+M RLWGENFF+ +K +
Sbjct: 233 FGVDESKMMERLWGENFFDPATKKW 257
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 252 NSKPYVVVQETRKRKGLKEGLPDLNQYLDTL 344
+S+ +V + RKRKGLKE + L+ + D L
Sbjct: 813 SSQANQLVLDIRKRKGLKEQMTPLSDFEDKL 843
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 106 bits (255), Expect = 9e-24
Identities = 46/100 (46%), Positives = 65/100 (65%)
Frame = +3
Query: 12 YQTFQRIVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 191
YQ F R++E+VNV +A Y D + +G+ V P KG+V F +GLHGWAFTL F++MY K
Sbjct: 175 YQAFSRVIESVNVTMAPYEDKN--LGDCMVAPEKGTVAFSAGLHGWAFTLSNFAKMYKAK 232
Query: 192 FKIDLVKLMNRLWGENFFNANSKPYVVVQETRKRKGLKEG 311
FK+D K+M RLWGEN+F+ +K + + K + G
Sbjct: 233 FKVDEAKMMERLWGENYFDHTTKKWTTTAPSTSSKTCQRG 272
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 243 FNANSKPYVVVQETRKRKGLKEGLPDLNQYLDTL 344
F S+ V+ + RKRKGLK+ + L+ Y D L
Sbjct: 820 FQEGSEAAKVITDIRKRKGLKDIITPLSDYEDKL 853
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/87 (40%), Positives = 59/87 (67%)
Frame = +3
Query: 6 RLYQTFQRIVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYA 185
+ YQT ++++VN ++++ D +V P+KG+V F SGLHGWA + F++MY+
Sbjct: 359 KAYQTLSSLIDSVNATMSSHKD-------AQVYPTKGTVVFSSGLHGWAVAISNFAKMYS 411
Query: 186 DKFKIDLVKLMNRLWGENFFNANSKPY 266
KFK++ K+++RLWGENFF+ +K +
Sbjct: 412 SKFKVEESKMIDRLWGENFFDLATKKW 438
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 55.2 bits (127), Expect = 3e-08
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +3
Query: 12 YQTFQRIVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMY--A 185
Y + +E +N +I++ S G G VDP+ G+V F SG GW+FTL+ F+ +Y
Sbjct: 296 YFKLRHTLEAINDLISSCSTTVG--GTQLVDPAAGNVCFASGSAGWSFTLQSFAHLYLKI 353
Query: 186 DKFKIDLVKLMNRLWGENFFNANSKPY 266
+ D K +RLWG+ +++ +++ +
Sbjct: 354 HGIQFDHEKFASRLWGDLYYHPDTRTF 380
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 105 PSKGSVGFGSGLHGWAFTLKQFSEMYADKF-KIDLVKLMNRLWGENFFNANSKPYV 269
P KG+V F L GW F + QF+E YA K I+ L+ LWG +F+ K V
Sbjct: 210 PQKGNVVFACALDGWGFRIHQFAEFYAAKLPNINANALLKGLWGPRYFHKKKKMIV 265
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 72 DSGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNA 251
D+ E P G+V F GW F L +++ A K + D +L+ LWG+ +F+
Sbjct: 205 DAADEEEDAFQPQNGNVVFACAREGWGFRLVTLAKLLAPKLRADPAELLKGLWGQKYFDE 264
Query: 252 NSKPYV 269
S+ V
Sbjct: 265 RSRTVV 270
>04_04_0294 +
24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 178 ISENCLSVNAQPWRPDPKPTDPLLGS 101
I E +NA+ W PDP DPL GS
Sbjct: 495 IDEKQAWLNAESWEPDPVEADPLKGS 520
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 GFGSGLHGWAFTLKQFSEMYADKFKIDLVKL-MNRLWGENFF 245
G G+G+ W T+ ++ YA+K K D + N +GEN F
Sbjct: 191 GVGAGMLSWDSTVAAYAADYAEKRKSDCRNVHSNGPYGENLF 232
>06_03_0637 - 22995831-22996667,22997200-22997694
Length = 443
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3
Query: 152 RPTVETRSETD*PLAWVDADLTHRTAV 72
RP+ T SET PLAWVD THR V
Sbjct: 15 RPSAATPSETL-PLAWVDRYPTHRGLV 40
>01_07_0331 +
42804385-42804659,42806175-42806340,42806424-42806549,
42807142-42807207,42807645-42807698,42808843-42809019,
42809100-42809102
Length = 288
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 111 KGSVGFGSGLHGWAFTLK--QFSEMYADKFKIDLVKLMNRLWGENFFNANSKPY 266
K S+GF + W K SE+YA+ +D VKL+ LWG N+ PY
Sbjct: 203 KDSIGF---IVHWDILSKYEDMSELYAES--LDRVKLLTNLWG-NYSIPKDNPY 250
>01_06_0364 -
28749825-28750053,28750442-28750621,28751018-28751147,
28751442-28751756,28752033-28752075,28752108-28752500
Length = 429
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 272 RTGNKKEERLEGRSPRFESIFGHAVKPLANAN 367
R G K EE EGR PRFE + + PLAN N
Sbjct: 61 RNGGKGEE--EGR-PRFEVVRDDLLHPLANGN 89
>11_06_0114 - 20284840-20284844,20285280-20285402,20285504-20287937
Length = 853
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 TQTVL-RDVRRQVQNRPSETHEQTVGRELLQCQLQAIRCRTGNKKEERLEGRSP 316
T+TV+ +DV V + V + ++QC+LQ + C T N + R+ P
Sbjct: 269 TKTVVSKDVSASVHPMGNLATRLFVDKMMVQCELQPVPCETFNSYDTRVHILQP 322
>05_01_0187 + 1349725-1352238
Length = 837
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 TQTVL-RDVRRQVQNRPSETHEQTVGRELLQCQLQAIRCRTGNKKEERLEGRSP 316
T+TV+ +DV V + V + ++QC+LQ + C T N + R+ P
Sbjct: 232 TKTVVSKDVSASVHPMGNLATRLFVDKMMVQCELQPVPCETFNSYDTRVHILQP 285
>08_02_0092 +
12265446-12265809,12266147-12266743,12266792-12266861,
12267325-12267427
Length = 377
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 151 AQPWRPDPKPTDPLLGSTRTSPIGPLSSE*VAMMTLTFSTIR 26
A+ +R P PT P + PI P + +A M + ST+R
Sbjct: 77 AKFYREPPPPTSPAPPQCPSRPIPPFAGPSIAAMAVPSSTLR 118
>01_06_0425 + 29264714-29266135
Length = 473
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 95 PRRPKQGVSRFRIWSPRLGVYTQTVLRDVRRQVQNRPSETHEQTVGRELLQCQLQAIRCR 274
P RP Q + W+PRL V T V + V+ +P+E +++ Q QA
Sbjct: 250 PGRPSQPMGCDAPWTPRLVVQTTPVRPAKKEVVKAKPAEP-PKSLDFSKANVQEQA---- 304
Query: 275 TGNKKEERLEGRSP 316
G ++ R GR P
Sbjct: 305 GGQERRPRKRGRKP 318
>01_05_0402 + 21810906-21811831,21811875-21812472,21813119-21813391
Length = 598
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 260 AIRCRTGNKKEERLEGRSPRFESIFGHAV 346
A RC +G+ E L+G PRF + G A+
Sbjct: 116 ASRCNSGSYYREVLDGIDPRFSHLTGGAI 144
>04_04_1199 + 31684441-31684884
Length = 147
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 229 HSLFMSFTRSILNLSAYISENCLSVNAQP 143
H+L M S++N+ A ISE C S P
Sbjct: 25 HTLVMELMASLINILALISEACRSAEKLP 53
>03_06_0490 +
34289904-34289967,34291912-34292237,34292401-34292536,
34292651-34292793,34292880-34293003,34293562-34293963,
34294121-34294176
Length = 416
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 30 IVENVNVIIATYSDDSGPMGEVRVDPSKGSVGFGSGLHGW 149
I+++ NV I ++SD R D G GFGS GW
Sbjct: 57 ILQSANVKIFSFSDLRIATRNFRPDSVLGEGGFGSVYKGW 96
>12_02_0886 + 24014478-24014565,24014929-24015413
Length = 190
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 45 NVIIATYSDDSGPMGEVRVDPSKGSVGFGSG 137
N I+A DD+G G VR PS S G G G
Sbjct: 92 NAIVA--DDDAGDDGNVRRPPSSSSRGGGGG 120
>11_06_0252 - 21713955-21714473
Length = 172
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 145 PWRPDPKPTDPLLGSTRTSPIGPL 74
PW PDPK T P S SP G L
Sbjct: 16 PWGPDPKATSP---SPSPSPCGDL 36
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 162 KQFSEMYADKFKIDLVKLMNRLWGENFFNANSKPYVVVQETRKRKGLKEGLPDLNQYLDT 341
K + +MY I E+ F +K +++QE R+ LKE L + ++
Sbjct: 1086 KSYLQMYESAIVIQTGLRAMAACNEHRFRRETKASIIIQEARETGALKEAKDKLEKRVEE 1145
Query: 342 L 344
L
Sbjct: 1146 L 1146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,095,868
Number of Sequences: 37544
Number of extensions: 249078
Number of successful extensions: 694
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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