Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N14
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 285 2e-77
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 285 2e-77
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 158 3e-39
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 158 3e-39
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 33 0.17
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 33 0.17
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 33 0.17
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 32 0.38
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 31 0.51
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 31 0.88
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 31 0.88
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.2
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.2
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.7
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 29 2.7
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 29 2.7
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 29 2.7
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 29 2.7
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 29 2.7
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 29 2.7
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 29 2.7
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 29 3.6
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 3.6
Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 4.7
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 28 4.7
U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical pr... 28 4.7
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 28 4.7
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 28 4.7
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 28 4.7
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 28 4.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 6.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 6.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 28 6.2
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 28 6.2
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 28 6.2
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 28 6.2
AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical ... 28 6.2
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 28 6.2
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006701-3|AAF60394.2| 198|Caenorhabditis elegans Mediator prot... 28 6.2
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 27 8.2
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 27 8.2
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 27 8.2
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 27 8.2
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 27 8.2
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 27 8.2
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 27 8.2
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 285 bits (698), Expect = 2e-77
Identities = 128/165 (77%), Positives = 143/165 (86%)
Frame = +2
Query: 20 EGAMADENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 199
EG ++DEN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL E
Sbjct: 683 EGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVE 742
Query: 200 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQA 379
IQCPE AVGGIYGVLNRRRGHVFEESQV GTPMFVVKAYLPVNESFGFTADLRSNTGGQA
Sbjct: 743 IQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQA 802
Query: 380 FPQCVFDHWQILPGDPCEPNSKPYVVVQETRTRKVLEGRSPRFES 514
FPQCVFDHWQ+LPGDP E +KP +V +TR RK L+ P ++
Sbjct: 803 FPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 285 bits (698), Expect = 2e-77
Identities = 128/165 (77%), Positives = 143/165 (86%)
Frame = +2
Query: 20 EGAMADENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 199
EG ++DEN+RGVRFN++DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL E
Sbjct: 683 EGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVE 742
Query: 200 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQA 379
IQCPE AVGGIYGVLNRRRGHVFEESQV GTPMFVVKAYLPVNESFGFTADLRSNTGGQA
Sbjct: 743 IQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQA 802
Query: 380 FPQCVFDHWQILPGDPCEPNSKPYVVVQETRTRKVLEGRSPRFES 514
FPQCVFDHWQ+LPGDP E +KP +V +TR RK L+ P ++
Sbjct: 803 FPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 158 bits (384), Expect = 3e-39
Identities = 67/138 (48%), Positives = 93/138 (67%)
Frame = +2
Query: 20 EGAMADENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 199
EG + +E +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E
Sbjct: 780 EGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVE 839
Query: 200 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQA 379
+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQA
Sbjct: 840 VVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQA 899
Query: 380 FPQCVFDHWQILPGDPCE 433
F F HWQ++PGDP +
Sbjct: 900 FCMSAFHHWQLVPGDPLD 917
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 158 bits (384), Expect = 3e-39
Identities = 67/138 (48%), Positives = 93/138 (67%)
Frame = +2
Query: 20 EGAMADENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 199
EG + +E +R V+F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E
Sbjct: 655 EGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVE 714
Query: 200 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQA 379
+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQA
Sbjct: 715 VVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQA 774
Query: 380 FPQCVFDHWQILPGDPCE 433
F F HWQ++PGDP +
Sbjct: 775 FCMSAFHHWQLVPGDPLD 792
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 70.5 bits (165), Expect = 9e-13
Identities = 36/107 (33%), Positives = 53/107 (49%)
Frame = +2
Query: 107 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVA 286
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V E
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKVLSEDINE 791
Query: 287 GTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 427
T +F V + +PV ESF F LR T G A Q F HWQ++ DP
Sbjct: 792 ATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +2
Query: 263 VFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDP 427
V E T +F V + +PV ESF F LR T G A Q F HWQ++ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 40.7 bits (91), Expect = 8e-04
Identities = 29/119 (24%), Positives = 51/119 (42%)
Frame = +2
Query: 20 EGAMADENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 199
EG + + G+ I D + H A+ +I T + + A L+EP+ E
Sbjct: 593 EGPLIKSRIAGIHVRIQDGSTH--AVDSTEIAMINTMQNMMRESFEKANWLLLEPIMKVE 650
Query: 200 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQ 376
P G + L +R + G + +A P+++ FG+T++LRS T G+
Sbjct: 651 ATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEGK 707
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 267 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 443
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 444 SHTLSYRK 467
S RK
Sbjct: 269 RRAASPRK 276
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 267 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 443
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 444 SHTLSYRK 467
S RK
Sbjct: 269 RRAASPRK 276
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 267 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 443
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 444 SHTLSYRK 467
S RK
Sbjct: 269 RRAASPRK 276
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 267 SRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCP-ETRASPTP 443
+R SP H S RR P R+ SPP +P+ R +R A I P E R SP P
Sbjct: 211 ARGNDSPLHRSSAARRHSPPPRRA-SPPRRTSSPK-RDARPAREIRDSREPREVRRSPPP 268
Query: 444 SHTLSYRK 467
S RK
Sbjct: 269 RRAASPRK 276
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.38
Identities = 36/133 (27%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Frame = +3
Query: 57 DSTFMTSPFTLTPFTEVAVKSFQRLGDACTRVC*PRSPGLWNPCTFAXXXXXXXXXXXXT 236
DSTF+ S T P A Q G P P L P T T
Sbjct: 66 DSTFLASETTTNPAPMSA--GIQTRGSYANTKSLP-VPDL-PPSTLKTTTKPVITATRST 121
Query: 237 AC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSI-TGRS 413
A T + ++P + RT +T + SPPT TP RS +A ++ T ++
Sbjct: 122 ARITTTKASTLEPPEAPTKAST--ARTISTTETTTSPPTTTVTPRTTRSSTARTVATTKT 179
Query: 414 CPETRASPTPSHT 452
P T + T T
Sbjct: 180 SPSTLRTTTKPPT 192
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 31.5 bits (68), Expect = 0.51
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 136 MPVRVSVDRAAQAYGTRVPLRDPVSGGGG---RWYLRRAEQTXXXXXXXXXXXXHTHVRG 306
+PV + R++ + R S R YLR ++ H G
Sbjct: 265 LPVIIDFPRSSPLRAAEISRRKSTSHSTSLSKRRYLRSRSRSLSKSPARRRSR-HLSRSG 323
Query: 307 EGVPARQRVVRVHRRPALQHRRAGVPAVRLRSLADPARRPVRAQLQAIRCRTGNKN 474
PA QR R R + RR+G + R RS + P +RPVR R RT N+N
Sbjct: 324 SRTPA-QRHSR--RSESTSRRRSGRHS-RSRSRSPPRKRPVRRSRSRSRSRTPNRN 375
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/81 (24%), Positives = 29/81 (35%)
Frame = +3
Query: 258 GTCSRSRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASP 437
G C S K AH C C + + T P P + + S+ + T S
Sbjct: 394 GHCQHSVKYMAHYCRKACNLCEVEVTTTTTTTPKPVPRNKEKENKSASSTTRGTSTATST 453
Query: 438 TPSHTLSYRKQERGKCLKEGL 500
TP T + + KC + L
Sbjct: 454 TPKTTTTTTSAPKEKCEDKNL 474
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 30.7 bits (66), Expect = 0.88
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 246 TDGAGTCSRSRKSPAHP-CSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPE 422
TD T S S SP CS S + S +P T +P E R+ R S ++ + P
Sbjct: 117 TDSPTTHSVSTPSPTDSVCS----PSSSVASSATPSTSSPVDESRQCRKRS-LSSSTTPS 171
Query: 423 TRASPTP 443
T A P P
Sbjct: 172 TTAPPQP 178
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +3
Query: 309 RRTCPS--TSRSGSPPTCAP-TPEGRRSRSASSITGRSCPETRASPTPSHT 452
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 81 RHEIPSFMTSLQAPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 131
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 390 HCGNACPPVLERRSAVNPNDSLTGRYAFTTNMGVPA 283
HC A P++E + N +D+L RY T G+PA
Sbjct: 490 HC-LAAMPLVENDCSANKDDALFSRYLHTKQRGIPA 524
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +2
Query: 107 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 268
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 269 EESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 373
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Frame = +3
Query: 321 PSTSRSGSPP-TCAPTPEGRRSRSASS---------ITGRSCPETRASPTPSHTLSYRKQ 470
PSTS++G + P E RRSR S+ + PE A P P K+
Sbjct: 199 PSTSQNGKTTLSTTPQSEERRSRRKSARLLASEQMDVEDEDEPEAAADPEPPKIQEPEKK 258
Query: 471 ERGKCLKEGLPDL 509
++ +KE +PD+
Sbjct: 259 KQKVSIKEEVPDV 271
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 267 SRSRKSPA---HPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSAS 395
+R R+SP+ P + RR PS SRS +P P RRS SAS
Sbjct: 373 ARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSAS 418
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 309 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 452
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 309 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 452
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 324 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 440
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 324 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 440
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 309 RRTCPS--TSRSGSPPTCAP--TPEGRRSRSASSITGRSCPETRASPTPSHT 452
R PS TS PP P P G SA S+ G P T + TPS T
Sbjct: 175 RHEIPSFMTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPT 226
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 324 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 440
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +3
Query: 324 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPT 440
S RSG PP A TP G+ SR A + P+ A+PT
Sbjct: 409 SVDRSGQPPISASTP-GKASR-ADLFNRLATPKVTATPT 445
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 345 PPTCAPTPE--GRRSRSASSITGRSCPETRASPTPSHTLSYRKQER 476
PP TPE +++ S + + + P TP+ TLS R++ R
Sbjct: 195 PPVQVVTPEKKSKKNSSKNELDSKDVPSCSGESTPAGTLSPRRETR 240
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 324 STSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPS 446
S+S+ PP+ +P+ GRR R +++ S A+ TP+
Sbjct: 503 SSSKMPPPPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPA 543
>Z69636-2|CAA93463.3| 247|Caenorhabditis elegans Hypothetical
protein F20B10.3 protein.
Length = 247
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -1
Query: 432 SHGSPGRICQ*SKTHCGNACPPVLERRSAVNPNDSLTGRYAFTTNMGVPATCDSSNTCPR 253
S G+ G Q S GN PV + V D+ Y TT M +P SSNT P
Sbjct: 85 STGNCGVTQQASACSTGNCNGPVAGSANVVPVFDASI--YTTTTPMPIPIRTISSNTAPI 142
Query: 252 RLFSTP 235
++ P
Sbjct: 143 KVIRVP 148
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 107 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 253
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 136 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 222
MP +SV+R A +AYG V L DP G G
Sbjct: 98 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U97004-5|AAO26009.1| 240|Caenorhabditis elegans Hypothetical
protein R08E5.2b protein.
Length = 240
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 136 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 222
MP +SV+R A +AYG V L DP G G
Sbjct: 1 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 31
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 136 MPVRVSVDRAA--QAYGTRVPLRDPVSGGGG 222
MP +SV+R A +AYG V L DP G G
Sbjct: 98 MPATMSVERRAMLRAYGAEVILSDPAEGHPG 128
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 357 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 479
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 357 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 479
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 357 APTPEGRRSRSASSITGRSC----PETRASPTPSHTLSYRKQERG 479
A TP GR S++ RS P +RA+P P H L Y ERG
Sbjct: 571 AETP-GRYFPENSAVLERSSTPSFPVSRATPLPFHPLLYNNGERG 614
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +3
Query: 273 SRKSPAHPCSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTP 443
S P P R P + PP P+P+ R R+ S R+ P T SP P
Sbjct: 136 SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP 192
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 330 SRSGSPPTCAPTPEGRRSRSASSITGRSCP 419
SRS SPP +P+P+ RR S S +G + P
Sbjct: 253 SRSNSPPNRSPSPKKRRDNS-SPRSGSASP 281
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 489 SSTFLVLVSCTTTYGLELGSHGSPGRICQ*SKTHCGNAC 373
+S FL+ + T G G G G CQ S+ C N C
Sbjct: 2 ASFFLIALLATPALGCIGGLGGGGGGCCQPSQPACANPC 40
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 489 SSTFLVLVSCTTTYGLELGSHGSPGRICQ*SKTHCGNAC 373
+S FL+ + T G G G G CQ S+ C N C
Sbjct: 2 ASFFLIALLATPALGCIGGLGGGGGGCCQPSQPACANPC 40
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 489 SSTFLVLVSCTTTYGLELGSHGSPGRICQ*SKTHCGNAC 373
+S FL+ + T G G G G CQ S+ C N C
Sbjct: 2 ASFFLIALLATPALGCIGGLGGGGGGCCQPSQPACANPC 40
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 321 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRAS 434
P TS G C P G S S GR CPE++ S
Sbjct: 273 PGTSSPGGSAECIPCSPGSFSSKGSGQCGR-CPESQYS 309
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 191 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 367
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 20 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 77
Query: 368 GGQAFP 385
G FP
Sbjct: 78 GNGQFP 83
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 191 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 367
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 123 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 180
Query: 368 GGQAFP 385
G FP
Sbjct: 181 GNGQFP 186
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 191 LCEIQCP-EVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNT 367
LC I V GG+Y +++R G F G FV + GFT L +N
Sbjct: 136 LCAISSNGAVEGGGVYYMISRSLGPEF--GGAIGVLFFVANVFSCALYISGFTEALMNNI 193
Query: 368 GGQAFP 385
G FP
Sbjct: 194 GNGQFP 199
>AF003740-1|AAM15561.2| 488|Caenorhabditis elegans Hypothetical
protein C41D11.3 protein.
Length = 488
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 342 SPPTCAPTPE-GRRSRSASSITGRSCPETRASPTPSHTLSYR 464
SP TP RRSRS+ S S ET S TPS +LS R
Sbjct: 408 SPTKYPVTPVYTRRSRSSLSDIRESTSETTGSITPSTSLSER 449
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 27.9 bits (59), Expect = 6.2
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +3
Query: 240 C*TDGAGTCSRSRKSPAHPCSW*R----RTCPSTSRSGSPPTCAPTPEGRRSRSASSITG 407
C D CS SP P + T STS + + PT PTP R + SA +I
Sbjct: 219 CFEDNHKDCSSGSTSPTCPKNATAVASVTTTASTSTTKTSPTKPPTPTSRPT-SAPTIPP 277
Query: 408 RSCPETRASPTPSHTLSYRKQER 476
+ + +P TLS + R
Sbjct: 278 QPSANSTRAPDIGKTLSTQPPRR 300
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +3
Query: 174 LWNPCTFAXXXXXXXXXXXXTAC*TDGAGTCSRSRKSPAHPCSW*RRTCPSTSRSGSPP- 350
L N C T C +DG G C K+ P + R C + P
Sbjct: 884 LQNNCPINYDCTLNALTQEHTCCGSDGQGVCPSGEKAFMDPRTNSPRQCAMAADGKCPGG 943
Query: 351 -TCAPTPEGRRSRSASSITGRSCPETRA 431
C + + +I G CP R+
Sbjct: 944 YLCRFSQSNHKYYCCGNIQGSMCPSGRS 971
>AC006701-3|AAF60394.2| 198|Caenorhabditis elegans Mediator protein
20 protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 124 WNDLTATSVNGVSVKGDVINVESNPSQVLI 35
W T+ G +VKG V+ +E +PS ++I
Sbjct: 115 WMIRVGTATQGTTVKGVVVEIEYDPSIIVI 144
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TCPSTSRSGSPPTCAPTPEGRRSRSAS-SITGRSCPETRASPTPSHT 452
T PST+ + + T TP+ S S S S T + T A+ TP T
Sbjct: 602 TVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPT 648
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TCPSTSRSGSPPTCAPTPEGRRSRSAS-SITGRSCPETRASPTPSHT 452
T PST+ + + T TP+ S S S S T + T A+ TP T
Sbjct: 602 TVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPT 648
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -3
Query: 442 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 281
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 491 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 550
Query: 280 LRLLEHVPAPSVQHAVD 230
R +VP P V+ A+D
Sbjct: 551 SREANNVPMPRVKGALD 567
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -3
Query: 442 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 281
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 504 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 563
Query: 280 LRLLEHVPAPSVQHAVD 230
R +VP P V+ A+D
Sbjct: 564 SREANNVPMPRVKGALD 580
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -3
Query: 442 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 281
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 503 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 562
Query: 280 LRLLEHVPAPSVQHAVD 230
R +VP P V+ A+D
Sbjct: 563 SREANNVPMPRVKGALD 579
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = -3
Query: 442 GVGL-ARVSGQDLPVIEDALRERLPSGVGAQVGGEPERL-VDGQVRLHH----EHGCAGD 281
G GL S Q+ DA+R+R P G G ++ + Q L+H +G
Sbjct: 506 GSGLNGNSSNQNHSEYSDAVRQRGPGGSGGRLDYRESHVPTSSQENLNHGRMYGYGAPPP 565
Query: 280 LRLLEHVPAPSVQHAVD 230
R +VP P V+ A+D
Sbjct: 566 SREANNVPMPRVKGALD 582
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 321 PSTSRSGSPPTCAPTPEGRRSRSASSITGRSCPETRASPTPSHTLSY 461
P + G PP A T GRR +TG S PE R P P++ L++
Sbjct: 491 PFKGQFGGPPIIA-TINGRRHEIR--LTG-SAPEVRIEPEPAYHLTH 533
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,823,467
Number of Sequences: 27780
Number of extensions: 349204
Number of successful extensions: 1509
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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