Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N12
(494 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 180 1e-46
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 179 2e-46
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 29 0.29
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 29 0.29
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 0.51
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 1.2
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 1.6
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.1
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 2.7
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 25 4.7
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 25 4.7
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 6.3
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 25 8.3
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 180 bits (438), Expect = 1e-46
Identities = 92/164 (56%), Positives = 115/164 (70%)
Frame = +3
Query: 3 TRGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECST 182
T KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRLD+GNF+WGSE +
Sbjct: 14 TGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVS 73
Query: 183 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAE 362
+KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY + +G KG K T
Sbjct: 74 KKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG-SKGKKATSTP 132
Query: 363 EAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 494
+S+ +K+ +R SKV+ LE QF GRL A V+S
Sbjct: 133 -----NPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSS 171
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 179 bits (436), Expect = 2e-46
Identities = 92/164 (56%), Positives = 115/164 (70%)
Frame = +3
Query: 3 TRGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECST 182
T KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRLD+GNF+WGSE +
Sbjct: 14 TGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVS 73
Query: 183 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAE 362
+KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY + +G KG K T
Sbjct: 74 KKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG-SKGKKATATP 132
Query: 363 EAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 494
+S+ +K+ +R SKV+ LE QF GRL A V+S
Sbjct: 133 -----TPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSS 171
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 29.5 bits (63), Expect = 0.29
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 45 ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRI 197
EL +N + Q+ L+ S T YRA+ LDTG+ E + K RI
Sbjct: 1108 ELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDTGDLMAVKEVALHKPRI 1158
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 29.5 bits (63), Expect = 0.29
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 321 PLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGL 449
PL R+K +LT E + + S T+KK+ + + SK G+
Sbjct: 569 PLSRRKARQLTALELGVSPEALSSATSKKHNKKNKRSKQRSGV 611
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 28.7 bits (61), Expect = 0.51
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 267 VVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSK 434
V DA ++ E ++ +KK +KL EA+ K++ +K KK+ +R S+
Sbjct: 434 VTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSE 489
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 1.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 66 WQPGDLTHTSSSYEWAHVC 10
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.1 bits (57), Expect = 1.6
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 57 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 236
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 237 RTKTLVKNAIVVVDATPFRQWYE 305
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 269 DNSILYQGFGTHQFIVRGIINNI 201
+NS+ +Q F +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 2.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 305 FIPLPERCGIHHDNSILYQ 249
F+P PE C I+H+ I Q
Sbjct: 477 FLPAPEECNIYHNEHIQVQ 495
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.4 bits (53), Expect = 4.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 362 LSLSELGTFLPSEW 321
LSL+E GTFL EW
Sbjct: 1554 LSLNECGTFLQKEW 1567
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 4.7
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 162 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 335
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 336 K 338
+
Sbjct: 310 Q 310
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 312 YLLPLGRKKGAKLTE 356
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 24.6 bits (51), Expect = 8.3
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 118 LPPRDLTKWMRWG-PSL 71
L P+D+ KW RW PSL
Sbjct: 32 LSPQDILKWCRWTLPSL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,258,959
Number of Sequences: 5004
Number of extensions: 48177
Number of successful extensions: 136
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 194131776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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