Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N11
(563 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 259 1e-69
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 259 1e-69
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 259 1e-69
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 258 3e-69
03_01_0034 + 318432-318825,318902-319851 258 3e-69
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 258 3e-69
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 258 3e-69
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 257 5e-69
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 148 3e-36
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 144 4e-35
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 144 4e-35
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 144 6e-35
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 92 2e-19
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 32 0.27
05_01_0300 + 2340251-2340791,2340892-2341325 31 0.84
01_06_0317 + 28425408-28426079,28426286-28426351 30 1.1
04_01_0578 + 7507204-7507436,7509588-7509618,7509634-7509774,750... 29 1.9
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 29 2.6
02_04_0537 - 23734010-23734715,23735326-23735333 29 2.6
10_06_0172 + 11473892-11474896 28 4.5
04_04_1423 - 33455818-33457076,33457165-33457201 28 4.5
12_02_0292 + 16979550-16980662,16983249-16983731 28 5.9
08_02_0787 - 21200762-21201142 28 5.9
06_01_1000 - 7778907-7780721 28 5.9
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 28 5.9
03_05_0204 - 21961332-21961715,21962030-21962374 28 5.9
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 27 7.8
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 27 7.8
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367... 27 7.8
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 259 bits (635), Expect = 1e-69
Identities = 118/142 (83%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 243 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 302
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTK 324
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQMLN+QNKNSS FVEWIPNNVK+ VCDIP GLKMA+TFIG
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIG 369
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 259 bits (635), Expect = 1e-69
Identities = 118/142 (83%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 243 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 302
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTK 324
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQMLN+QNKNSS FVEWIPNNVK+ VCDIP RGLKMAATF+G
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVG 369
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 259 bits (635), Expect = 1e-69
Identities = 118/142 (83%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 243 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 302
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTK 324
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQMLN+QNKNSS FVEWIPNNVK+ VCDIP GLKMA+TFIG
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIG 369
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 258 bits (631), Expect = 3e-69
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 363 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 422
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 423 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 482
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 483 ADPRHGRYLTASAMFRGKMSTK 504
Score = 85.4 bits (202), Expect = 3e-17
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQM+N+QNKNSS FVEWIPNNVK+ VCDIP RGL MA+TF+G
Sbjct: 505 EVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVG 549
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 258 bits (631), Expect = 3e-69
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 243 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 302
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTK 324
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQMLN+QNKNSS FVEWIPNNVK+ VCDIP GLKMA+TFIG
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIG 369
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 258 bits (631), Expect = 3e-69
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 204 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 263
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 264 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 323
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 324 ADPRHGRYLTASAMFRGKMSTK 345
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQM+N+QNKNSS FVEWIPNNVK+ VCDIP RGL MA+TFIG
Sbjct: 346 EVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIG 390
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 258 bits (631), Expect = 3e-69
Identities = 117/142 (82%), Positives = 130/142 (91%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRF
Sbjct: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 243 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 302
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRG+MS K
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTK 324
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQM+N+QNKNSS FVEWIPNNVK+ VCDIP RGL MA+TFIG
Sbjct: 325 EVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIG 369
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 257 bits (629), Expect = 5e-69
Identities = 117/142 (82%), Positives = 129/142 (90%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ ATLSVHQLVEN DE +DNEALYDICFRTLKL+ P++GDLNHL+S TMSGVT CLRF
Sbjct: 199 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRF 258
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
PGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A
Sbjct: 259 PGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCA 318
Query: 362 CDPRHGRYLTVAAIFRGRMSMK 427
DPRHGRYLT +A+FRGRMS K
Sbjct: 319 ADPRHGRYLTASAMFRGRMSTK 340
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +3
Query: 429 EVDEQMLNIQNKNSSSFVEWIPNNVKTXVCDIPSRGLKMAATFIG 563
EVDEQM+N+QNKNSS FVEWIPNNVK+ VCDIP GL MA+TF+G
Sbjct: 341 EVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVG 385
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 148 bits (358), Expect = 3e-36
Identities = 61/137 (44%), Positives = 92/137 (67%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ + LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRF 244
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
G +N D+ + N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +MMA
Sbjct: 245 DGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAK 304
Query: 362 CDPRHGRYLTVAAIFRG 412
CDPRHG+Y+ ++RG
Sbjct: 305 CDPRHGKYMACCLMYRG 321
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 144 bits (349), Expect = 4e-35
Identities = 61/137 (44%), Positives = 89/137 (64%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ + LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +MMA
Sbjct: 245 DGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAK 304
Query: 362 CDPRHGRYLTVAAIFRG 412
CDPRHG+Y+ ++RG
Sbjct: 305 CDPRHGKYMACCLMYRG 321
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 144 bits (349), Expect = 4e-35
Identities = 61/137 (44%), Positives = 89/137 (64%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ + LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF
Sbjct: 185 YNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRF 244
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
G LN D+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +MMA
Sbjct: 245 DGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAK 304
Query: 362 CDPRHGRYLTVAAIFRG 412
CDPRHG+Y+ ++RG
Sbjct: 305 CDPRHGKYMACCLMYRG 321
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 144 bits (348), Expect = 6e-35
Identities = 59/137 (43%), Positives = 91/137 (66%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ + LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF
Sbjct: 266 YNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRF 325
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAA 361
G +N D+ + N+VP+PR+HF + +AP+ S + +VPE+T +F+ ++MA
Sbjct: 326 DGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAK 385
Query: 362 CDPRHGRYLTVAAIFRG 412
CDPRHG+Y+ ++RG
Sbjct: 386 CDPRHGKYMACCLMYRG 402
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 92.3 bits (219), Expect = 2e-19
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Frame = +2
Query: 2 HEATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF 181
+ + L++ +L N D +DN AL I L L+ PT+ N LVS MS TT LR+
Sbjct: 186 YNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRY 245
Query: 182 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMA 358
PG +N DL L +++P PR HF M G+ PLT R R TV ++ +++ KN+M
Sbjct: 246 PGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMV 305
Query: 359 ACDPRH-----GRYLTVAAIFRGRM 418
+ R+ +Y+++ I +G +
Sbjct: 306 SSYARNKEASQAKYISILNIIQGEV 330
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 32.3 bits (70), Expect = 0.27
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 298 PRAHRPRAHTADVRR*EHDGGV*PASRPLPHR-RSHLPWSY-VYEVKSMSRCLTFRTRTR 471
PR+ R R+ + D + HD V P+SR H R H Y Y SR F T
Sbjct: 293 PRSKRRRSTSRDHYQERHDRSVSPSSREQRHSYRGHGHDYYPPYHSMDKSRRKHFETDRH 352
Query: 472 RPSWN 486
R SWN
Sbjct: 353 RTSWN 357
>05_01_0300 + 2340251-2340791,2340892-2341325
Length = 324
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 85 LLPHAETIHTHIWRLEPPGVADHVWRYHLSQVPWSVECGS 204
LL H W L P +AD WR ++ W+ EC S
Sbjct: 253 LLIHHTKEELQRWGLSPEMIADQQWRASANRRSWADECSS 292
>01_06_0317 + 28425408-28426079,28426286-28426351
Length = 245
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +1
Query: 367 PASRPLPHRRSHLPWSYVYEVKSMSRCLTFRTRTRRPSWNGSRTT*RPXCATSRPAD 537
PA PLP P + V + +R R R RRPS GS T P A +R AD
Sbjct: 121 PAPAPLPPPPPPPPDTSVAAAAAAARPWNLRERKRRPSARGS-TAASPTTAWARRAD 176
>04_01_0578 +
7507204-7507436,7509588-7509618,7509634-7509774,
7509883-7509972,7511382-7511401,7512111-7512202,
7512790-7512858,7513400-7513560
Length = 278
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 304 RAVLLT-AAGREGSETGHEEMQTWEWHHVHCQLAEIRIQLTREPETGGNARHGQRHQVVQ 128
RA+ LT +G GS T +E+ W VHC L I ++ T GN RH + Q
Sbjct: 12 RALELTDRSGNGGSST--DELPGW---FVHCGLDSIE----KDKMTLGNRRHRDQGQGSD 62
Query: 127 VAICG 113
+ +CG
Sbjct: 63 IGLCG 67
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +2
Query: 5 EATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 184
E TL +H + TD ID E + L + + +S+T+ G R P
Sbjct: 97 EQTLVLHSPEKKTDHV-SIDTE----VHLALTPLEPIVFFGFHKRMSVTVVGTVEGGRPP 151
Query: 185 GQLNADLRKLAVNMVPFPRLHFFMPGFA 268
++ DL+K VN+ PRL +A
Sbjct: 152 TKIKTDLKKPVVNLACHPRLPVLYVAYA 179
>02_04_0537 - 23734010-23734715,23735326-23735333
Length = 237
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 265 RSPHVPRQSAVPRAHRPRAHTADV 336
RSP PR ++ PR+ R RAH A V
Sbjct: 125 RSPASPRTASSPRSSRARAHPAPV 148
>10_06_0172 + 11473892-11474896
Length = 334
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 149 SATPGGSSRHMWVWIVSA-CGSRCHRGLH 66
S+ PGG + H+WV SA C RC H
Sbjct: 184 SSAPGGGAVHVWVGDASAQCPGRCAWPFH 212
>04_04_1423 - 33455818-33457076,33457165-33457201
Length = 431
Score = 28.3 bits (60), Expect = 4.5
Identities = 27/118 (22%), Positives = 37/118 (31%), Gaps = 4/118 (3%)
Frame = -2
Query: 460 F*MLSICSSTSLHRHTTTEDGCDG----EVTAVTRVTRRHHVLSVEHLLCELGDGERAVL 293
F + +C H T G G E+ VT + V S LL E+ R +
Sbjct: 250 FGLAKLCDREDTHLTITGARGTPGYAAPELWMPLPVTHKCDVYSYGMLLFEMLGRRRNLE 309
Query: 292 LTAAGREGSETGHEEMQTWEWHHVHCQLAEIRIQLTREPETGGNARHGQRHQVVQVAI 119
L A E W WH E + GG + +V VA+
Sbjct: 310 LGAGAGAHGHGSQEWYPRWVWHRFEAGETEAVLARATAAAAGGGREREKAERVCMVAL 367
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 304 RAVLLTAAGREGSETGHEEMQTWEWHHVHCQLAEIRIQLTREPE 173
R V+ T+AG G+ E ++W HH +R TRE E
Sbjct: 488 RKVVATSAGAPGTRQRRPEAKSWRQHHWTPARTRLRC-FTRETE 530
>08_02_0787 - 21200762-21201142
Length = 126
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 418 HTTTEDGCDGEVTAVTRVTRRHHVLSVE 335
H E G DGE AVTR+ RR V + E
Sbjct: 99 HQVVEVGDDGEGAAVTRLRRRRMVRTCE 126
>06_01_1000 - 7778907-7780721
Length = 604
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 196 CGSPQAGSEHGAIPTSAFLHARFRSPHVPRQSAV 297
C S AGS A PT+A L A S P SA+
Sbjct: 20 CSSSSAGSPAAAAPTAASLLAELLSDPAPSASAL 53
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 418 VYEVKSMSRCLTFRTRTRRPSWNG 489
VY + S+S LT+R+ + R WNG
Sbjct: 388 VYIIPSLSHILTYRSASARLIWNG 411
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 388 HRRSHLPWSYVYEVKSMSRCLTFRTRTRRPSW 483
HR W++ + K++ C +F++ + RPSW
Sbjct: 90 HRAMARFWAHFIDHKAIFSCHSFKSYSTRPSW 121
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 271 PHV-PRQSAVPRAHRPRAHTAD 333
PH P +SA PRAHRP + D
Sbjct: 291 PHAKPARSAAPRAHRPPSSVMD 312
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 497 QREDRRVRHPVPRTEDG 547
QRE RVR P+PR+ DG
Sbjct: 190 QRERERVRPPLPRSSDG 206
>03_01_0480 -
3676529-3676687,3676767-3676931,3677044-3677220,
3678170-3678273,3678700-3678843,3679831-3679898,
3680059-3680162,3680759-3680767,3681572-3681657,
3681918-3683373
Length = 823
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -2
Query: 361 RRHHVLSVEHLLCELGDGERAVLLTAAGREGSETG-HEEMQT--WEWHHVHCQLAEIRIQ 191
R H+ ++ +HLL D +T A E S H M+T WE + C + I Q
Sbjct: 624 RNHNRINRKHLLLREKDASTGWQITKAATENSTNAVHTPMKTKWWEKNMKSCNMKNIESQ 683
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,070,104
Number of Sequences: 37544
Number of extensions: 387048
Number of successful extensions: 1145
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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