Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N10
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001891-1|AAH01891.1| 423|Homo sapiens COP9 constitutive photo... 195 9e-50
AF098109-1|AAD41247.1| 423|Homo sapiens COP9 complex subunit 3 ... 195 9e-50
AF031647-1|AAC14197.1| 403|Homo sapiens JAB1-containing signalo... 193 4e-49
X89713-1|CAA61857.1| 907|Homo sapiens death associated protein ... 30 4.3
U76111-1|AAC51166.1| 907|Homo sapiens translation repressor NAT... 30 4.3
U73824-1|AAB49973.1| 907|Homo sapiens p97 protein. 30 4.3
BC111548-1|AAI11549.2| 869|Homo sapiens eukaryotic translation ... 30 4.3
BC111415-1|AAI11416.1| 907|Homo sapiens eukaryotic translation ... 30 4.3
BC043149-1|AAH43149.2| 907|Homo sapiens eukaryotic translation ... 30 4.3
BC039851-1|AAH39851.1| 907|Homo sapiens eukaryotic translation ... 30 4.3
BC018975-1|AAH18975.1| 907|Homo sapiens eukaryotic translation ... 30 4.3
BC018746-1|AAH18746.1| 907|Homo sapiens eukaryotic translation ... 30 4.3
AK223548-1|BAD97268.1| 907|Homo sapiens eukaryotic translation ... 30 4.3
AB209267-1|BAD92504.1| 940|Homo sapiens eukaryotic translation ... 30 4.3
>BC001891-1|AAH01891.1| 423|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 3 (Arabidopsis)
protein.
Length = 423
Score = 195 bits (475), Expect = 9e-50
Identities = 97/171 (56%), Positives = 124/171 (72%)
Frame = +2
Query: 11 GNFRELCEIISKSDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVSKFSLLQTSGDADKS 190
G +LCE+I+KS ++L +N +HL+TVL LD+Q+HSLGVLAVL KFS+ D
Sbjct: 19 GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVP---DFE 75
Query: 191 TMFQQIHDFISNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRKIQLFD 370
T+F Q+ FIS CNGE +R + + +A LCH LTN LVE KQP+RGI ILK+AI K+Q+
Sbjct: 76 TLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNT 135
Query: 371 SQLTSIHADLCQLCLLSKCMKPALEFLNTDVTGIGAELGGNNDSKHFLLYY 523
+QLTSIHADLCQLCLL+KC KPAL +L+ D+ I E G D+KHFL YY
Sbjct: 136 NQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKE-NGAYDAKHFLCYY 185
>AF098109-1|AAD41247.1| 423|Homo sapiens COP9 complex subunit 3
protein.
Length = 423
Score = 195 bits (475), Expect = 9e-50
Identities = 97/171 (56%), Positives = 124/171 (72%)
Frame = +2
Query: 11 GNFRELCEIISKSDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVSKFSLLQTSGDADKS 190
G +LCE+I+KS ++L +N +HL+TVL LD+Q+HSLGVLAVL KFS+ D
Sbjct: 19 GQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVP---DFE 75
Query: 191 TMFQQIHDFISNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRKIQLFD 370
T+F Q+ FIS CNGE +R + + +A LCH LTN LVE KQP+RGI ILK+AI K+Q+
Sbjct: 76 TLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNT 135
Query: 371 SQLTSIHADLCQLCLLSKCMKPALEFLNTDVTGIGAELGGNNDSKHFLLYY 523
+QLTSIHADLCQLCLL+KC KPAL +L+ D+ I E G D+KHFL YY
Sbjct: 136 NQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKE-NGAYDAKHFLCYY 185
>AF031647-1|AAC14197.1| 403|Homo sapiens JAB1-containing
signalosome subunit 3 protein.
Length = 403
Score = 193 bits (470), Expect = 4e-49
Identities = 96/167 (57%), Positives = 123/167 (73%)
Frame = +2
Query: 23 ELCEIISKSDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVSKFSLLQTSGDADKSTMFQ 202
+LCE+I+KS ++L +N +HL+TVL LD+Q+HSLGVLAVL KFS+ D T+F
Sbjct: 3 QLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVP---DFETLFS 59
Query: 203 QIHDFISNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRKIQLFDSQLT 382
Q+ FIS CNGE +R + + +A LCH LTN LVE KQP+RGI ILK+AI K+Q+ +QLT
Sbjct: 60 QVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLT 119
Query: 383 SIHADLCQLCLLSKCMKPALEFLNTDVTGIGAELGGNNDSKHFLLYY 523
SIHADLCQLCLL+KC KPAL +L+ D+ I E G D+KHFL YY
Sbjct: 120 SIHADLCQLCLLAKCFKPALPYLDVDMMDICKE-NGAYDAKHFLCYY 165
>X89713-1|CAA61857.1| 907|Homo sapiens death associated protein 5
protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>U76111-1|AAC51166.1| 907|Homo sapiens translation repressor NAT1
protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>U73824-1|AAB49973.1| 907|Homo sapiens p97 protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>BC111548-1|AAI11549.2| 869|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 869
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>BC111415-1|AAI11416.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>BC043149-1|AAH43149.2| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>BC039851-1|AAH39851.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>BC018975-1|AAH18975.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>BC018746-1|AAH18746.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>AK223548-1|BAD97268.1| 907|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 variant protein.
Length = 907
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 64 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 120
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 121 KALEEPKYSSLYAQLC 136
>AB209267-1|BAD92504.1| 940|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 2 variant protein.
Length = 940
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 179 ADKSTMFQQIHDFI-SNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
A+ S ++ HD I G +L+PE + +LC L N VE K ++G+ +L I
Sbjct: 97 ANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILL---IVD 153
Query: 356 IQLFDSQLTSIHADLC 403
L + + +S++A LC
Sbjct: 154 KALEEPKYSSLYAQLC 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,457,821
Number of Sequences: 237096
Number of extensions: 1334883
Number of successful extensions: 2812
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2806
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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