Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N10
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 29 2.7
Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z66560-3|CAA91451.2| 265|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 28 3.6
AF100306-8|ABB88213.1| 860|Caenorhabditis elegans Hypothetical ... 28 4.7
AF100306-7|ABB88214.1| 895|Caenorhabditis elegans Hypothetical ... 28 4.7
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 27 6.2
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 27 6.2
Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 27 8.2
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 27 8.2
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 8.2
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 365 FDSQLTSIHADLCQLCLLSKCMKPALEFLNTDVTGIGAELG--GNNDSKHFLL 517
F+ Q+TS+ A + Q +K + PAL N VTG ELG G +D ++ ++
Sbjct: 19 FNFQMTSVRAQIHQQLYKTKTIAPALTITNA-VTGGFDELGEFGLDDVENLMI 70
>Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical
protein T27F6.8 protein.
Length = 301
Score = 28.3 bits (60), Expect = 3.6
Identities = 31/114 (27%), Positives = 48/114 (42%)
Frame = +2
Query: 14 NFRELCEIISKSDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVSKFSLLQTSGDADKST 193
NF I S+S +Q+ + N ++++S G+L + + LL D
Sbjct: 3 NFFRKLSIRSRSPPAVQKKKSSHNL------LKKNSSGLLRFIRNNDKLLDDEPIFDMP- 55
Query: 194 MFQQIHDFISNCNGEQVRLSPELYAELCHILTNHLVEIKQPIRGIEILKRAIRK 355
M +H EQ+RL A LC + HL E IR +E+ KR I +
Sbjct: 56 MHLMLHVIDQMSFFEQIRL-----ARLCREVKEHLEEKYSKIRKLELRKRDINE 104
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 32 EIISKSDDVLQRNSAHLNTVLETLD-IQQHSLGVLAVLVSKFSLLQTSGDADKSTMFQQI 208
E+I+K + +R+ + V ++ ++++L +L L K L GDAD T+F+++
Sbjct: 635 EVINKRNRENKRSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTVFKEV 694
>Z66560-3|CAA91451.2| 265|Caenorhabditis elegans Hypothetical
protein D1053.3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 173 GDADKSTMFQQIHDFISNCNGEQVRLSPELYAELCHILTNHLVEIKQP 316
G K+ F+Q+ D SN + V Y + H+ T H+VEI P
Sbjct: 18 GSGHKALFFKQLCDAASNYE-KHVHYPDVHYLTIDHMGTEHVVEITDP 64
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 32 EIISKSDDVLQRNSAHLNTVLETLD-IQQHSLGVLAVLVSKFSLLQTSGDADKSTMFQQI 208
E+I+K + +R+ + V ++ ++++L +L L K L GDAD T+F+++
Sbjct: 635 EVINKRNRENKRSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTVFKEV 694
>AF100306-8|ABB88213.1| 860|Caenorhabditis elegans Hypothetical
protein T24C4.6a protein.
Length = 860
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 11 GNFRELCEIISK--SDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVS 148
GN E+ E+ S+ DD ++ A L + E+++I +S GVLA +VS
Sbjct: 673 GNIAEVDELRSQLMKDDYVKIFCALLESQEESIEISYNSAGVLAHMVS 720
>AF100306-7|ABB88214.1| 895|Caenorhabditis elegans Hypothetical
protein T24C4.6b protein.
Length = 895
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 11 GNFRELCEIISK--SDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVS 148
GN E+ E+ S+ DD ++ A L + E+++I +S GVLA +VS
Sbjct: 673 GNIAEVDELRSQLMKDDYVKIFCALLESQEESIEISYNSAGVLAHMVS 720
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 6.2
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +2
Query: 92 LETLDIQQHSLGVLAVLVSKFSLLQTSGDADKSTMFQQIHDFIS-NCNGEQVRLSPELYA 268
LE D + + L ++V++ L T G D ST F + +F+S + S E+ +
Sbjct: 893 LENEDTEDTNFDPLTIMVNRVVGLDTFGK-DPSTEFCIVDEFLSFSPYFTDFSTSSEIRS 951
Query: 269 EL-CHILTNHLVEIKQPIRGIEILKRAIRKIQLFDSQLTSIHADLCQLCLLSKCMKPALE 445
+ C+I + I I I D + ++H L LC L +K
Sbjct: 952 KRDCYIPKIDIARNLFATSSISFF--LIENIPRQDGVIATLHLPLHPLCKLGGSIKGTFP 1009
Query: 446 FLNTD 460
L+TD
Sbjct: 1010 MLDTD 1014
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 6.2
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +2
Query: 92 LETLDIQQHSLGVLAVLVSKFSLLQTSGDADKSTMFQQIHDFIS-NCNGEQVRLSPELYA 268
LE D + + L ++V++ L T G D ST F + +F+S + S E+ +
Sbjct: 893 LENEDTEDTNFDPLTIMVNRVVGLDTFGK-DPSTEFCIVDEFLSFSPYFTDFSTSSEIRS 951
Query: 269 EL-CHILTNHLVEIKQPIRGIEILKRAIRKIQLFDSQLTSIHADLCQLCLLSKCMKPALE 445
+ C+I + I I I D + ++H L LC L +K
Sbjct: 952 KRDCYIPKIDIARNLFATSSISFF--LIENIPRQDGVIATLHLPLHPLCKLGGSIKGTFP 1009
Query: 446 FLNTD 460
L+TD
Sbjct: 1010 MLDTD 1014
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 501 ESLLPPSSAPIPVTSVFKNSKAGFIHLESKQS*HKSACIDVN*ESNSCIFLIALFNISIP 322
+S+ + P +FKNS + + +++ H CI N E NS +F + +
Sbjct: 556 KSMAEVNRRPPTAGFLFKNSMSELVKQLAQKEPHYIRCIKPNEEKNSNVFDLERVEHQVR 615
Query: 321 LIGCLISTR 295
+G L + R
Sbjct: 616 YLGLLENVR 624
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -1
Query: 501 ESLLPPSSAPIPVTSVFKNSKAGFIHLESKQS*HKSACIDVN*ESNSCIFLIALFNISIP 322
+S+ + P +FKNS + + +++ H CI N E NS +F + +
Sbjct: 556 KSMAEVNRRPPTAGFLFKNSMSELVKQLAQKEPHYIRCIKPNEEKNSNVFDLERVEHQVR 615
Query: 321 LIGCLISTR 295
+G L + R
Sbjct: 616 YLGLLENVR 624
>Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical
protein H03G16.5 protein.
Length = 227
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 32 EIISKSDDVLQRNSAHLNTVLETLDIQQHSLGVLAVLVSK 151
E+I K +L+ N H NT+ ET+ + ++ + L + +K
Sbjct: 97 ELIDKYKAMLENNQNHKNTLRETIQLYKNLIHRLLEIAAK 136
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 242 VRLSPELYAELCHILTNHLVEIK-QPIRGIEILKRAIRKIQLFDSQLTSIHADLCQLCL 415
V++ + E ++T H + Q + GI+IL +I L S SI ++CQ L
Sbjct: 542 VQIPHAVMKEGVEVITTHSIHKSLQSVGGIQILLPLFAQIDLPSSNDNSIDGEVCQTLL 600
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 242 VRLSPELYAELCHILTNHLVEIK-QPIRGIEILKRAIRKIQLFDSQLTSIHADLCQLCL 415
V++ + E ++T H + Q + GI+IL +I L S SI ++CQ L
Sbjct: 542 VQIPHAVMKEGVEVITTHSIHKSLQSVGGIQILLPLFAQIDLPSSNDNSIDGEVCQTLL 600
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 350 RKIQLFDSQLTSIHADLCQLCLLSKCMKPALE 445
RK Q FD + + C+ C L +C+K ++
Sbjct: 65 RKNQCFDDSFSCLKTPYCRACRLVQCVKVGMK 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,913,760
Number of Sequences: 27780
Number of extensions: 236185
Number of successful extensions: 707
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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