Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_N08
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.1  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   3.7  
AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450 pr...    23   4.9  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   6.5  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 369 SPARRNQPAWRLACSAW 319
           SPA R +P WR A   W
Sbjct: 235 SPAHRRKPRWRRAGRRW 251


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +2

Query: 170 PQMLQQYLQT---PPAGMDMRLWKQAQADNP 253
           P  + Q+ QT   P A   M+ WK+ + +NP
Sbjct: 83  PPPINQFTQTLDKPTAQQVMKCWKKYRPENP 113


>AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 176 MLQQYLQTPPAGMDMRLWKQAQADNPDPDNYIP 274
           M ++Y   P   M  R     QA N DPD Y P
Sbjct: 18  MDEKYFPEPEVYMPQRF--DEQAPNYDPDAYYP 48


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 529  NFFIGGQSCTNTTDDFLTSDH 467
            N++  G +C+    D LT DH
Sbjct: 1142 NYYTYGAACSEVEIDCLTGDH 1162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,216
Number of Sequences: 2352
Number of extensions: 10779
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)