Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N07
(476 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 303 2e-84
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 303 2e-84
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 303 2e-84
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 294 9e-82
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 2.4
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 23 4.1
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 23 4.1
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 4.1
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 4.1
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 5.5
DQ080821-1|AAY89467.1| 170|Anopheles gambiae transcription fact... 23 7.2
DQ080820-1|AAY89466.1| 170|Anopheles gambiae transcription fact... 23 7.2
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 22 9.6
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 303 bits (744), Expect = 2e-84
Identities = 138/142 (97%), Positives = 142/142 (100%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFETFNSPAMYVAIQAVLS 476
TQIMFETFN+PAMYVAIQAVLS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLS 142
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 303 bits (744), Expect = 2e-84
Identities = 138/142 (97%), Positives = 142/142 (100%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFETFNSPAMYVAIQAVLS 476
TQIMFETFN+PAMYVAIQAVLS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLS 142
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 303 bits (744), Expect = 2e-84
Identities = 138/142 (97%), Positives = 142/142 (100%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFETFNSPAMYVAIQAVLS 476
TQIMFETFN+PAMYVAIQAVLS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLS 142
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 294 bits (722), Expect = 9e-82
Identities = 134/142 (94%), Positives = 138/142 (97%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDDD ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKM
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120
Query: 411 TQIMFETFNSPAMYVAIQAVLS 476
TQIMFETF +PA+YVAIQAVLS
Sbjct: 121 TQIMFETFAAPAVYVAIQAVLS 142
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 158 GSPSPPGCHGRHGTEGL 208
G P PPG +G G +GL
Sbjct: 716 GPPGPPGFNGPKGDKGL 732
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 91 APACAKPVSPVTTRLAPSSRPSWVALATRVSWSAWDRRTLTS 216
APA AKP + APSS + + R S+ D ++ TS
Sbjct: 411 APATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 91 APACAKPVSPVTTRLAPSSRPSWVALATRVSWSAWDRRTLTS 216
APA AKP + APSS + + R S+ D ++ TS
Sbjct: 411 APATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 167 SPPGCHGRHGTEGLLRR**GPEQERYPH 250
+P CHGR GT+ + Q RY H
Sbjct: 2342 NPSLCHGREGTKSIFND--FIHQHRYSH 2367
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 46 PKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSR 150
P+ + ++ S + AP A+P P TTR AP R
Sbjct: 86 PQPSLAPVVPSSVVTAPP-ARPSQPPTTRFAPEPR 119
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 5.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 167 SPPGCHGRHGTEGLLRR**GPEQERYPH 250
+P CHGR GT+ + Q RY H
Sbjct: 2332 NPSLCHGREGTKSIFSD--FIHQHRYSH 2357
>DQ080821-1|AAY89467.1| 170|Anopheles gambiae transcription factor
3C protein.
Length = 170
Score = 22.6 bits (46), Expect = 7.2
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +3
Query: 168 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 323
RH ++ KDSY EA+ KYP+ DD++ W F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162
>DQ080820-1|AAY89466.1| 170|Anopheles gambiae transcription factor
3C protein.
Length = 170
Score = 22.6 bits (46), Expect = 7.2
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +3
Query: 168 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 323
RH ++ KDSY EA+ KYP+ DD++ W F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 22.2 bits (45), Expect = 9.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 28 PTQKHTPKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSRPSWVALAT 174
PT P ATT + + T+AP V+P TT + + +A+
Sbjct: 25 PTTTVAP--ATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAS 71
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,321
Number of Sequences: 2352
Number of extensions: 10597
Number of successful extensions: 44
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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