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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_N05
         (533 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0745 + 27716622-27717017                                         33   0.11 
01_03_0015 + 11669321-11670070                                         30   1.3  
10_02_0042 + 4493692-4494019,4494428-4494441                           29   1.8  
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317...    29   1.8  
07_01_0040 + 325737-328181                                             29   2.4  
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499...    29   2.4  
05_05_0080 - 22243175-22243226,22243342-22243389,22243485-222435...    29   3.1  
04_04_0744 + 27713422-27713814                                         29   3.1  
04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389...    29   3.1  
08_02_0235 + 14627648-14628889                                         28   4.1  
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498...    28   4.1  
03_01_0022 + 189525-189551,189600-189950                               28   4.1  
01_07_0025 + 40565296-40565497,40565591-40566075                       28   4.1  
10_08_0432 - 17875427-17875807,17877810-17879099                       28   5.4  
09_01_0008 - 233137-233279,233712-233827,235376-235720,236218-23...    28   5.4  
07_01_0282 - 2070027-2070041,2074763-2075062,2075154-2075722,207...    28   5.4  
01_06_0181 - 27262425-27263337,27263452-27263633                       28   5.4  
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644           27   7.2  
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464...    27   7.2  
04_04_0534 + 26071227-26071811                                         27   7.2  
04_01_0187 - 2153546-2154520,2154581-2155858                           27   7.2  
02_03_0344 + 17967687-17968309,17968402-17968744,17970285-179704...    27   7.2  
02_03_0343 + 17961977-17962596,17962670-17963015,17965933-179662...    27   7.2  
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962     27   7.2  
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834           27   9.5  
10_02_0198 - 6611775-6612611                                           27   9.5  
05_07_0364 - 29611149-29611211,29611441-29611623,29611796-296118...    27   9.5  
05_03_0317 - 12249228-12249275,12263876-12264518,12264954-122666...    27   9.5  
05_03_0216 + 10370531-10371922,10378656-10378808                       27   9.5  
04_03_0755 + 19310648-19311603,19312420-19312633                       27   9.5  
03_05_1032 - 29861859-29862011,29862347-29862470,29862557-298627...    27   9.5  
03_05_0851 + 28225608-28226570                                         27   9.5  
03_05_0186 + 21731294-21732277                                         27   9.5  
02_05_0625 + 30453521-30453890,30454215-30454352,30454458-304547...    27   9.5  

>04_04_0745 + 27716622-27717017
          Length = 131

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +1

Query: 256 HTAHPTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 429
           H   PTPPT   P     +     R+ L+ G C+N + +++A+   P      PL  G
Sbjct: 27  HCPTPTPPTPSTPTPTPAAFGKCPRDALKLGVCANVLGLIKAKVGVPPAEPCCPLLEG 84


>01_03_0015 + 11669321-11670070
          Length = 249

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -3

Query: 513 IRITIQMVYICYRRACARPSGIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAP 343
           + + + ++++C R    R  G  G SR  T +R  R   R    GA DDDR   PAP
Sbjct: 67  VLLALVVLHLCNRGR--RGGGHSGDSR--TTRRRERRLLRSLAIGAGDDDRDGGPAP 119


>10_02_0042 + 4493692-4494019,4494428-4494441
          Length = 113

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 462 RPSGIVGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPPET 334
           RP G    S  ++++  ++P  R   A A  ++RVA  AP  T
Sbjct: 3   RPKGGAAASSSSSKKPKAKPKQRGGAAAASGEERVAASAPSPT 45


>04_04_0962 + 29728983-29729034,29729622-29731369,29731656-29731742,
            29732035-29732199,29732437-29732526,29732863-29733027,
            29733124-29733418,29733550-29733764,29733879-29733947,
            29734107-29734184,29734466-29734529,29734658-29734897,
            29734985-29735124
          Length = 1135

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +3

Query: 183  VSIDR-LKPAYLLSESPTLQGATKPPHSAPDSTYVT*SGRRVRFQD 317
            +S++R L+   L SE+PT+   +KPP + P+   ++ S   VR+ +
Sbjct: 899  ISVERILQYTKLPSEAPTITEGSKPPMAWPEFGMISISNLEVRYAE 944


>07_01_0040 + 325737-328181
          Length = 814

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 335 VSGGAGVATRSSSSAPAHLIRGVG 406
           +SGG G ++ SSSS+ +HL  GVG
Sbjct: 74  ISGGNGSSSSSSSSSISHLSAGVG 97


>03_05_1122 +
           30546314-30549277,30549615-30549693,30549857-30549945,
           30550422-30550538,30550873-30551111,30552279-30552365,
           30552732-30552831,30553319-30553532,30553617-30553777
          Length = 1349

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 369 RRPRPRISSEVSGETTFAAWPVANRPRYRKAARTLVDNIYIP 494
           R  + +IS  + G    A W +  RPR     R  +D++YIP
Sbjct: 672 REEKQKISDHIKGMLLDAGWTIDLRPR---NGRNYLDSVYIP 710


>05_05_0080 -
           22243175-22243226,22243342-22243389,22243485-22243540,
           22243752-22243819,22244712-22244773,22245166-22245214,
           22245818-22245899,22245987-22246064,22246441-22246499,
           22246727-22246805,22246946-22247218
          Length = 301

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 380 ARTTMIVLLHQPPRRPLRSIKVLEPDSSTGSRDVGGVG 267
           A   ++ L+ + PR PL + +   PD++TG+R     G
Sbjct: 51  ATAPILRLVQRRPRAPLTAARAASPDAATGARSPSSGG 88


>04_04_0744 + 27713422-27713814
          Length = 130

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 268 PTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 429
           PTP T   P     +     R+ L+ G C+N + +++A+   P      PL  G
Sbjct: 31  PTPSTPSTPTPTPAAFGKCPRDALKLGVCANVLGLIKAKVGVPPAEPCCPLLEG 84


>04_03_0744 +
           19237901-19237912,19238119-19238611,19238860-19238928,
           19239124-19239140,19239260-19239357,19240019-19240156,
           19240710-19240899,19241175-19241307,19241505-19242442
          Length = 695

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = +1

Query: 361 TIIVVRARASHPRCRARRPLPRGQSRTAHDTGRPRARSSITY 486
           T I+ RAR  H RCR RRP  R +      T  P  RSS T+
Sbjct: 19  TKILSRARQIHRRCRRRRPRRRRRRLLLPLTPSP-PRSSSTH 59


>08_02_0235 + 14627648-14628889
          Length = 413

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +3

Query: 84  LKRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPP 257
           +K  L P + GPYK++S R +  +Q+++   +  V ++  +         PT +   +  
Sbjct: 283 IKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQI 342

Query: 258 HSAPDSTYV 284
               D TYV
Sbjct: 343 EVQEDLTYV 351


>05_06_0203 +
           26348360-26348458,26349584-26349645,26349808-26349895,
           26349985-26350085,26350130-26350223,26350323-26350730,
           26351090-26351521,26351612-26351755,26351824-26351940,
           26352842-26352949
          Length = 550

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 221 RVPDAARSHEASTQRTRLHLRHVIR*KSQVPGLLSTVTV 337
           R+PD  RSH+A+T  T   ++ V+  ++  P   +T  V
Sbjct: 264 RLPDPPRSHKATTSTTPAEIQKVVPPRAADPSSKTTTDV 302


>03_01_0022 + 189525-189551,189600-189950
          Length = 125

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 268 PTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASHPRCRARRPLPRG 429
           PTPP +  P   SG       + L+ G C+N + +++ +   P      PL  G
Sbjct: 23  PTPPVTPPPSPPSGGGNKCPIDALKLGVCANVLNLLKLKVGVPASEECCPLLGG 76


>01_07_0025 + 40565296-40565497,40565591-40566075
          Length = 228

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 414 SSRPTPRMRCAGADDDDRVATPA 346
           S R  PR R A ADDDD  ++P+
Sbjct: 179 SIRGAPRRRAAAADDDDMPSSPS 201


>10_08_0432 - 17875427-17875807,17877810-17879099
          Length = 556

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 432 LATRQRSSRPTPRMRCAGADDDDRVATP 349
           +   +RSS P P +   GAD+DD V  P
Sbjct: 374 IVAARRSSPPAPAVAANGADEDDLVFHP 401


>09_01_0008 -
           233137-233279,233712-233827,235376-235720,236218-236292,
           236508-236636,237516-237589,237836-237968,239366-239584,
           239671-239756,239843-241107,241304-241640,242548-242862,
           243614-243697,243776-243883,243981-244079
          Length = 1175

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = -1

Query: 491 YIYVIDERARGLPVSWAVRDWP--RGKGRLARHLG*DARARTTMI---VLLHQPPRRPLR 327
           +I ++      L   W  + W   RGK R    +G  A    + I   + +HQ PR PL 
Sbjct: 9   FIEMVSAGTLYLSGEWERKYWSCSRGKDRYPYPVGYHAVRHFSGISYTMQIHQGPRGPLF 68

Query: 326 SIKVLEPDSSTG 291
            +   + DSSTG
Sbjct: 69  QVTSTQGDSSTG 80


>07_01_0282 -
           2070027-2070041,2074763-2075062,2075154-2075722,
           2075812-2076337
          Length = 469

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 447 VGGSRLATRQRSSRPTPRMRCAGADDDDRVATPAPP 340
           VG  +   +QRS  P+   R A A D D    P PP
Sbjct: 395 VGNMQQQQQQRSMTPSASSRAAAATDADGEDPPPPP 430


>01_06_0181 - 27262425-27263337,27263452-27263633
          Length = 364

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
 Frame = -3

Query: 477 RRACARPSGIVGGSRLATRQRSSRPTPRMRCAG---ADDDDRVATPAPPETVTVDKSP 313
           RR C  P  + GG   +     S   PR RC      DDD+    P+  E +    +P
Sbjct: 8   RRQCRAPRRLDGGGGGSMDVHPSELLPRSRCTAPRRLDDDEMDVHPSEQELIETGFAP 65


>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
          Length = 581

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +3

Query: 87  KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPPH 260
           K  L P + GPYK++S R +  +Q+++   +  V ++  +         PT +   +   
Sbjct: 452 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIE 511

Query: 261 SAPDSTYV 284
              D TYV
Sbjct: 512 VQEDLTYV 519


>05_01_0538 +
           4646772-4647059,4647462-4647542,4647819-4647890,
           4648458-4649321
          Length = 434

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 30/91 (32%), Positives = 34/91 (37%)
 Frame = +1

Query: 214 YSASPRRCKEPRSLHTAHPTPPTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRARASH 393
           + AS R     R   T H     S  P   SGSR   DR+       S        R+SH
Sbjct: 214 HRASTRESSPVRRTVT-HDGHRKSSSPSRRSGSREVPDRDRSSRDRSSRDY----DRSSH 268

Query: 394 PRCRARRPLPRGQSRTAHDTGRPRARSSITY 486
            R R      R   R +HD  R R RSS  Y
Sbjct: 269 DRDRDHSS--RDYDRPSHDRDRDRDRSSRDY 297


>04_04_0534 + 26071227-26071811
          Length = 194

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -3

Query: 477 RRACARPSGIV----GGSRLATRQRSSRPTPRMR-CA 382
           R  CA+ + +      G+RLATR+R  RP  R R CA
Sbjct: 73  RSGCAQAATVAWRHTAGARLATRRRGRRPARRRRDCA 109


>04_01_0187 - 2153546-2154520,2154581-2155858
          Length = 750

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +3

Query: 87  KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV-SIDRLKPAYLLSESPTLQGATKPPH 260
           K  L P + GPYK++S R +  +Q+++   +  V ++  +         PT +   +   
Sbjct: 667 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIE 726

Query: 261 SAPDSTYV 284
              D TYV
Sbjct: 727 VQEDLTYV 734


>02_03_0344 +
           17967687-17968309,17968402-17968744,17970285-17970410,
           17970458-17970642,17970721-17970973
          Length = 509

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 284 DVGGVGCAVWRLRGSLQR 231
           DVGGVG  +WRLR S  R
Sbjct: 249 DVGGVGRRLWRLRESRTR 266


>02_03_0343 +
           17961977-17962596,17962670-17963015,17965933-17966291,
           17966384-17966636
          Length = 525

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 284 DVGGVGCAVWRLRGSLQR 231
           DVGGVG  +WRLR S  R
Sbjct: 248 DVGGVGRRLWRLRESRTR 265


>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
          Length = 774

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +1

Query: 376 RARASHPRCRARRPLPRGQSR-TAHDTG---RPRARSSIT 483
           +AR+SH    A RP P G+ + + HDT    RP  + S T
Sbjct: 676 QARSSHSSRPASRPKPSGKKKISEHDTDKSRRPHTKKSAT 715


>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
          Length = 324

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 87  KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 185
           K  L P + GPYK++S R +  +Q+++   +  V
Sbjct: 195 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 228


>10_02_0198 - 6611775-6612611
          Length = 278

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 87  KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 185
           K  L P + GPYK++S R +  +Q+++   +  V
Sbjct: 149 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 182


>05_07_0364 - 29611149-29611211,29611441-29611623,29611796-29611853,
            29612150-29612207,29612504-29612561,29612859-29612916,
            29613214-29613271,29613568-29613625,29613923-29613980,
            29614277-29614334,29614631-29614688,29614983-29615040,
            29615337-29615394,29615691-29615748,29616045-29616102,
            29616400-29616457,29616755-29616812,29617109-29617166,
            29617463-29617520,29617817-29617874,29618171-29618228,
            29618525-29618582,29618878-29618935,29619233-29619290,
            29619942-29619999,29620297-29620376,29620649-29620706,
            29621001-29621058,29621353-29621410,29621707-29621764,
            29622415-29622472,29622767-29622824,29623121-29623164,
            29623475-29623532,29623829-29623886,29624537-29624594,
            29624889-29624946,29625243-29625300,29625597-29625654,
            29626305-29626400,29626697-29626792,29627797-29627892,
            29628188-29628283,29629996-29630053,29630350-29630407,
            29630704-29630799,29631096-29631191,29632196-29632253,
            29632549-29632644,29633648-29633743,29634040-29634042
          Length = 1114

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 408  ETTFAAWPVANRPRYRKAARTLVD 479
            ETT A+WP+ +RP  RK     VD
Sbjct: 1086 ETTAASWPMNHRPHPRKTGFGEVD 1109


>05_03_0317 - 12249228-12249275,12263876-12264518,12264954-12266682,
            12283603-12283975,12284119-12284715
          Length = 1129

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +3

Query: 78   DALKRALQPPYTGPYKVISR-SDKTFQIDIA---GKIVTVSIDRLKPAYLLSESPTLQGA 245
            D  K  L P   GP+KV+++ ++  ++ID+    G   T ++  LKP   L E   L+  
Sbjct: 1016 DLRKYKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKP--YLGEEDELESR 1073

Query: 246  TKPPHSAPD 272
            T       D
Sbjct: 1074 TTQMQEGED 1082


>05_03_0216 + 10370531-10371922,10378656-10378808
          Length = 514

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 87  KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 185
           K  L P + GPYK++S R +  +Q+++   +  V
Sbjct: 417 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 450


>04_03_0755 + 19310648-19311603,19312420-19312633
          Length = 389

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -3

Query: 459 PSGIVGGSRLATRQRSSRPT--PRMRCAGADDDDRVATPAPPETVTVDKSPG 310
           P G+  G+RLA +Q+    T   R R  G    D      PP    +  +PG
Sbjct: 77  PRGMAVGTRLAVQQQQPTKTQQQRQRGIGCGGADAAGVAPPPSPRGMPMAPG 128


>03_05_1032 -
           29861859-29862011,29862347-29862470,29862557-29862759,
           29863081-29863199,29863489-29863623,29863695-29863950,
           29864749-29864880,29865001-29865222
          Length = 447

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 272 VGCAVWRLRGSLQRRGLAE*ISRLKSVDGNSN 177
           VGC   RL G LQ  GL   +  L SVDG ++
Sbjct: 362 VGCEKCRLWGKLQVLGLGTALKILFSVDGENH 393


>03_05_0851 + 28225608-28226570
          Length = 320

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = +1

Query: 220 ASPRRC----KEPRSLHTAHPTP-PTSRDPVEESGSRTFIDRNGLRGGWCSNTIIVVRAR 384
           A PRR     K PR L  AHP P   SR    E       ++N +R    ++ I V  A 
Sbjct: 158 AKPRRAAANPKPPRRLANAHPVPDKESRAKARERARERTKEKNRMRWVTLASAISVEAAT 217

Query: 385 AS 390
           A+
Sbjct: 218 AA 219


>03_05_0186 + 21731294-21732277
          Length = 327

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 87  KRALQPPYTGPYKVIS-RSDKTFQIDIAGKIVTV 185
           K  L P + GPYK++S R +  +Q+++   +  V
Sbjct: 284 KGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGV 317


>02_05_0625 +
           30453521-30453890,30454215-30454352,30454458-30454727,
           30454844-30454983,30455067-30455213,30455319-30456008
          Length = 584

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 431 WPRGKGRLARHLG*DARARTTMIVLLHQPPRRPLRSIKV 315
           W   +GRL R  G    A T M     + PR+P+ + KV
Sbjct: 47  WEGEEGRLRRAAGAARAAATEMWAFARKDPRKPVFAAKV 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,919,924
Number of Sequences: 37544
Number of extensions: 374777
Number of successful extensions: 1642
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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