Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N05
(533 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001256-1|AAN71012.1| 383|Drosophila melanogaster AT01668p pro... 32 0.43
AY094720-1|AAM11073.1| 367|Drosophila melanogaster GH18838p pro... 32 0.43
AE014297-364|AAN14325.1| 383|Drosophila melanogaster CG10999-PB... 32 0.43
AE014297-363|AAF51947.1| 383|Drosophila melanogaster CG10999-PA... 32 0.43
BT003563-1|AAO39567.1| 443|Drosophila melanogaster LP03430p pro... 32 0.57
AY069697-1|AAL39842.1| 443|Drosophila melanogaster LD46767p pro... 32 0.57
AE014134-1641|AAF52777.1| 443|Drosophila melanogaster CG4422-PA... 32 0.57
BT001643-1|AAN71398.1| 450|Drosophila melanogaster RE41083p pro... 29 4.0
AY051529-1|AAK92953.1| 310|Drosophila melanogaster GH18356p pro... 29 4.0
AE013599-608|AAF59121.2| 310|Drosophila melanogaster CG8708-PA,... 29 4.0
AE013599-607|AAM68854.1| 450|Drosophila melanogaster CG8708-PB,... 29 4.0
DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 prot... 29 5.3
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro... 29 5.3
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ... 29 5.3
AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-P... 29 5.3
AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown prot... 28 7.0
AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA... 28 7.0
>BT001256-1|AAN71012.1| 383|Drosophila melanogaster AT01668p
protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 260 QRTRLHLRHVIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDDLCRVASRE 439
Q T LH R +S P + +T VSGG G A + +P + R + + +V
Sbjct: 159 QETTLHQRSPAPQRS--PKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPKSPVKKVNMDT 216
Query: 440 PPTIPEGRAHAR 475
IPEG A R
Sbjct: 217 TTAIPEGTALCR 228
>AY094720-1|AAM11073.1| 367|Drosophila melanogaster GH18838p
protein.
Length = 367
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 260 QRTRLHLRHVIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDDLCRVASRE 439
Q T LH R +S P + +T VSGG G A + +P + R + + +V
Sbjct: 143 QETTLHQRSPAPQRS--PKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPKSPVKKVNMDT 200
Query: 440 PPTIPEGRAHAR 475
IPEG A R
Sbjct: 201 TTAIPEGTALCR 212
>AE014297-364|AAN14325.1| 383|Drosophila melanogaster CG10999-PB,
isoform B protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 260 QRTRLHLRHVIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDDLCRVASRE 439
Q T LH R +S P + +T VSGG G A + +P + R + + +V
Sbjct: 159 QETTLHQRSPAPQRS--PKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPKSPVKKVNMDT 216
Query: 440 PPTIPEGRAHAR 475
IPEG A R
Sbjct: 217 TTAIPEGTALCR 228
>AE014297-363|AAF51947.1| 383|Drosophila melanogaster CG10999-PA,
isoform A protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 260 QRTRLHLRHVIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDDLCRVASRE 439
Q T LH R +S P + +T VSGG G A + +P + R + + +V
Sbjct: 159 QETTLHQRSPAPQRS--PKIQATQRVSGGTGAAPTAGRLSPPFVRRAEPKSPVKKVNMDT 216
Query: 440 PPTIPEGRAHAR 475
IPEG A R
Sbjct: 217 TTAIPEGTALCR 228
>BT003563-1|AAO39567.1| 443|Drosophila melanogaster LP03430p
protein.
Length = 443
Score = 31.9 bits (69), Expect = 0.57
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 346 PPGDRYGR*KSWNLTLLP 293
PPG+R+GR + WN+ L+P
Sbjct: 60 PPGERFGRGRDWNVDLIP 77
>AY069697-1|AAL39842.1| 443|Drosophila melanogaster LD46767p
protein.
Length = 443
Score = 31.9 bits (69), Expect = 0.57
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 346 PPGDRYGR*KSWNLTLLP 293
PPG+R+GR + WN+ L+P
Sbjct: 60 PPGERFGRGRDWNVDLIP 77
>AE014134-1641|AAF52777.1| 443|Drosophila melanogaster CG4422-PA
protein.
Length = 443
Score = 31.9 bits (69), Expect = 0.57
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 346 PPGDRYGR*KSWNLTLLP 293
PPG+R+GR + WN+ L+P
Sbjct: 60 PPGERFGRGRDWNVDLIP 77
>BT001643-1|AAN71398.1| 450|Drosophila melanogaster RE41083p
protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 357 QHDHRRPRPRISSEVSGETTFAAWPVANRPRYRKAAR 467
+HDHR ++ ++ E W + N ++K AR
Sbjct: 76 KHDHRNDNVSVAEQLKKEVRILCWVMTNPTNHKKKAR 112
>AY051529-1|AAK92953.1| 310|Drosophila melanogaster GH18356p
protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 357 QHDHRRPRPRISSEVSGETTFAAWPVANRPRYRKAAR 467
+HDHR ++ ++ E W + N ++K AR
Sbjct: 76 KHDHRNDNVSVAEQLKKEVRILCWVMTNPTNHKKKAR 112
>AE013599-608|AAF59121.2| 310|Drosophila melanogaster CG8708-PA,
isoform A protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 357 QHDHRRPRPRISSEVSGETTFAAWPVANRPRYRKAAR 467
+HDHR ++ ++ E W + N ++K AR
Sbjct: 76 KHDHRNDNVSVAEQLKKEVRILCWVMTNPTNHKKKAR 112
>AE013599-607|AAM68854.1| 450|Drosophila melanogaster CG8708-PB,
isoform B protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 357 QHDHRRPRPRISSEVSGETTFAAWPVANRPRYRKAAR 467
+HDHR ++ ++ E W + N ++K AR
Sbjct: 76 KHDHRNDNVSVAEQLKKEVRILCWVMTNPTNHKKKAR 112
>DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 protein.
Length = 1412
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 268 PTPPTSRDPVEESGSRTFID 327
PT P S+DPV +S S F+D
Sbjct: 1354 PTTPFSKDPVAKSASHCFVD 1373
>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p protein.
Length = 1425
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 268 PTPPTSRDPVEESGSRTFID 327
PT P S+DPV +S S F+D
Sbjct: 1361 PTTPFSKDPVAKSASHCFVD 1380
>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
protein MUS101 protein.
Length = 1425
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 268 PTPPTSRDPVEESGSRTFID 327
PT P S+DPV +S S F+D
Sbjct: 1361 PTTPFSKDPVAKSASHCFVD 1380
>AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-PA
protein.
Length = 1425
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 268 PTPPTSRDPVEESGSRTFID 327
PT P S+DPV +S S F+D
Sbjct: 1361 PTTPFSKDPVAKSASHCFVD 1380
>AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown
protein.
Length = 1231
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +3
Query: 249 KPPHSAPDSTYVT*SGRRV----RFQDFYRP*RSPGGLV*QHDHRRPRPRISSEVSGETT 416
K P A DST V S R R + +R RS V HDH+ RP S V+ + +
Sbjct: 371 KMPQPAADSTTVP-SKRSPSYSHRSESSHRRDRSD--YVSDHDHKHQRPSKSESVNKDRS 427
Query: 417 FAAWPVANRPRYR 455
P+ P Y+
Sbjct: 428 LLPLPIGTLPSYQ 440
>AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA
protein.
Length = 1231
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +3
Query: 249 KPPHSAPDSTYVT*SGRRV----RFQDFYRP*RSPGGLV*QHDHRRPRPRISSEVSGETT 416
K P A DST V S R R + +R RS V HDH+ RP S V+ + +
Sbjct: 371 KMPQPAADSTTVP-SKRSPSYSHRSESSHRRDRSD--YVSDHDHKHQRPSKSESVNKDRS 427
Query: 417 FAAWPVANRPRYR 455
P+ P Y+
Sbjct: 428 LLPLPIGTLPSYQ 440
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,282,556
Number of Sequences: 53049
Number of extensions: 564951
Number of successful extensions: 1974
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -