Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_N04
         (143 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03109-1|AAA82108.1|  757|Homo sapiens aspartyl beta-hydroxylase...    43   2e-04
S83325-1|AAB50779.1|  758|Homo sapiens aspartyl(asparaginyl)beta...    43   2e-04
BC125127-1|AAI25128.1|  629|Homo sapiens PRPF39 protein protein.       28   4.6  
BC125126-1|AAI25127.1|  629|Homo sapiens PRPF39 protein protein.       28   4.6  
BC051886-1|AAH51886.1|  479|Homo sapiens PRPF39 protein protein.       28   4.6  
BC020655-1|AAH20655.1|  218|Homo sapiens Unknown (protein for IM...    28   4.6  
AK001990-1|BAA92024.1|  272|Homo sapiens protein ( Homo sapiens ...    28   4.6  

>U03109-1|AAA82108.1|  757|Homo sapiens aspartyl beta-hydroxylase
           protein.
          Length = 757

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/43 (46%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = +1

Query: 10  GFVLKTRHNRLSEAVDLLQEALE-GDIGPANESRFYYHLGDAL 135
           GF+LK + N+++E++  L+E +E GD G  ++ RFY+HLGDA+
Sbjct: 495 GFILKAQ-NKIAESIPYLKEGIESGDPG-TDDGRFYFHLGDAM 535


>S83325-1|AAB50779.1|  758|Homo sapiens
           aspartyl(asparaginyl)beta-hydroxylase protein.
          Length = 758

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/43 (46%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = +1

Query: 10  GFVLKTRHNRLSEAVDLLQEALE-GDIGPANESRFYYHLGDAL 135
           GF+LK + N+++E++  L+E +E GD G  ++ RFY+HLGDA+
Sbjct: 495 GFILKAQ-NKIAESIPYLKEGIESGDPG-TDDGRFYFHLGDAM 535


>BC125127-1|AAI25128.1|  629|Homo sapiens PRPF39 protein protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  LKTRHNRLSEAVDLLQEALEGDIGPANESRFY 114
           L+ RH  L EA  LLQ+A++ +    NES FY
Sbjct: 424 LERRHGNLEEAEHLLQDAIK-NAKSNNESSFY 454


>BC125126-1|AAI25127.1|  629|Homo sapiens PRPF39 protein protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  LKTRHNRLSEAVDLLQEALEGDIGPANESRFY 114
           L+ RH  L EA  LLQ+A++ +    NES FY
Sbjct: 424 LERRHGNLEEAEHLLQDAIK-NAKSNNESSFY 454


>BC051886-1|AAH51886.1|  479|Homo sapiens PRPF39 protein protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  LKTRHNRLSEAVDLLQEALEGDIGPANESRFY 114
           L+ RH  L EA  LLQ+A++ +    NES FY
Sbjct: 274 LERRHGNLEEAEHLLQDAIK-NAKSNNESSFY 304


>BC020655-1|AAH20655.1|  218|Homo sapiens Unknown (protein for
           IMAGE:4709634) protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  LKTRHNRLSEAVDLLQEALEGDIGPANESRFY 114
           L+ RH  L EA  LLQ+A++ +    NES FY
Sbjct: 68  LERRHGNLEEAEHLLQDAIK-NAKSNNESSFY 98


>AK001990-1|BAA92024.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11128 fis, clone PLACE1006236. ).
          Length = 272

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  LKTRHNRLSEAVDLLQEALEGDIGPANESRFY 114
           L+ RH  L EA  LLQ+A++ +    NES FY
Sbjct: 68  LERRHGNLEEAEHLLQDAIK-NAKSNNESSFY 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,529,570
Number of Sequences: 237096
Number of extensions: 246975
Number of successful extensions: 539
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 76,859,062
effective HSP length: 28
effective length of database: 70,220,374
effective search space used: 1334187106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)