Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_N03
(623 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 91 1e-19
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 64 1e-11
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 57 2e-09
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 56 5e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 44 1e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 43 4e-05
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 42 1e-04
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 30 0.24
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 29 0.41
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.72
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 1.7
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 27 2.9
SPBC428.03c |pho4||thiamine-repressible acid phosphatase Pho4|Sc... 26 3.8
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 3.8
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.1
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 26 5.1
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 25 8.9
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 25 8.9
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 8.9
SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate... 25 8.9
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 91.1 bits (216), Expect = 1e-19
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Frame = +1
Query: 88 VAIFLAITLLGFTLGDEIPTEDNVLVLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPE 267
+A FLA + F E+P ++K + +++ ++V+FYAPWCGHCK+LAPE
Sbjct: 7 LAAFLAFSGGFFCASAEVPK------VNKEGLNELITADKVLMVKFYAPWCGHCKALAPE 60
Query: 268 YANAATKLAEEESPX*NWAKRWMPTQWNKSLPESYGVRGYPTLKFFRNGNPV-DYSGGRQ 444
Y +AA +L ++ + + L Y +RGYPTL F+NG + YSG R+
Sbjct: 61 YESAADELEKD-----GISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRK 115
Query: 445 ADDIVNWLKKKTGPPAVEVTSAEQAKELIAANPVIVFGFFADQ 573
D +V +++K+ P ++ + A+ + V FF DQ
Sbjct: 116 HDALVKYMRKQLLPTVKPISKDTLENFVEKADDLAVVAFFKDQ 158
Score = 79.4 bits (187), Expect = 4e-16
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = +1
Query: 145 TEDNVLVLSKSNFDSVV-STTNYILVEFYAPWCGHCKSLAPEYANAATKLAEEESPX*NW 321
++++++VL NFD +V T +LVEFYAPWCGHCK+LAP Y KLAEE S N
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTY----EKLAEEYSDDSNV 408
Query: 322 AKRWMPTQWNKSLPESYGVRGYPTLKFFRNG---NPVDYSGGRQADDIVNWLKK 474
+ N S + G+PT+ FF+ NPV Y G R +D+ ++ K
Sbjct: 409 VVAKIDATENDI---SVSISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDK 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 64.5 bits (150), Expect = 1e-11
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +1
Query: 214 LVEFYAPWCGHCKSLAPEYANAATKLAEEESPX*NWAKRWMPTQWNKSLPESYGVRGYPT 393
L+EFYA WCGHCKSLAP Y L E+ + + + + + + Y + G+PT
Sbjct: 43 LIEFYATWCGHCKSLAPVYEELGA-LFEDHN---DVLIGKIDADTHSDVADKYHITGFPT 98
Query: 394 LKFF--RNGNPVDYSGGRQADDIVNWLKKKTGPPAVEVTSAEQAKELIAAN 540
L +F PV YS R D + ++ +KTG ++ EL + N
Sbjct: 99 LIWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLN 149
Score = 63.7 bits (148), Expect = 2e-11
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +1
Query: 136 EIPTEDNVLVLSKSNFDSVVSTTNY-ILVEFYAPWCGHCKSLAPEYANAATKLAEEESPX 312
+I NV+ L NFD VV +LVEFYA WCG+CK LAP Y E P
Sbjct: 135 KIVLPSNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE--PN 192
Query: 313 *NWAKRWMPTQWNKSLPESYGVRGYPTLKFFRNGN---PVDYSGGRQADDIVNWLKKKTG 483
K + + + V +PT+KFF + P Y G R + ++ ++ KK+G
Sbjct: 193 VEIVK--INADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 56.8 bits (131), Expect = 2e-09
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Frame = +1
Query: 163 VLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPEYANAATKLAEEESPX*NWAKRWMPT 342
+ S ++ S + + Y+ V+ YA WCG CK+++P ++ A+K A SP +AK +
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYA---SPKFVFAKVNVDE 62
Query: 343 QWNKSLPESYGVRGYPTLKFFRNGNPVDYSGGR--QA--DDIVNWLKKKTGPPAVEVTSA 510
Q + + GV+ PT FF NG +D G QA + + K TG A+ +S+
Sbjct: 63 Q--RQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSSS 120
Query: 511 EQAK 522
K
Sbjct: 121 APVK 124
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 55.6 bits (128), Expect = 5e-09
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Frame = +1
Query: 94 IFLA-ITLLGFTLGDEIPTEDNVLVLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPEY 270
+FLA +L+ G N + L+ NF V LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 271 ANAATKLAEEESPX*NWAKRWMPTQWNKSLPESYGVRGYPTLKFF---RNGNPV---DYS 432
A+ L P N+++ Y V+G+PT+K G+ + DY+
Sbjct: 71 QKLASNL-HSLLPV---TAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYN 126
Query: 433 GGRQADDIVNWLKKKTGPPAVEVTSAE 513
G R + ++ P V++ ++E
Sbjct: 127 GDRSYKSLQKFVSDSI-PSKVKILTSE 152
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 44.4 bits (100), Expect = 1e-05
Identities = 34/115 (29%), Positives = 54/115 (46%)
Frame = +1
Query: 82 MRVAIFLAITLLGFTLGDEIPTEDNVLVLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLA 261
MR++ +A + TL +P DN L +S VS + +++Y P CG CK L
Sbjct: 10 MRISWVVAFITMVQTLVSGVPLTDNDL-------ESEVSKGTWF-IKYYLPSCGACKRLG 61
Query: 262 PEYANAATKLAEEESPX*NWAKRWMPTQWNKSLPESYGVRGYPTLKFFRNGNPVD 426
P + N K A+E+ N+ + +K L +R PTL ++NG V+
Sbjct: 62 PMWDNMVEK-AKEQVEGSNF--HFGEVDCSKELSSCANIRAVPTLYLYQNGEIVE 113
Score = 28.3 bits (60), Expect = 0.95
Identities = 19/111 (17%), Positives = 49/111 (44%)
Frame = +1
Query: 142 PTEDNVLVLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPEYANAATKLAEEESPX*NW 321
PT + + ++ D+ ++ ++FY+ C C ++ + A ++ + +
Sbjct: 278 PTGTSKALALDADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVA--- 334
Query: 322 AKRWMPTQWNKSLPESYGVRGYPTLKFFRNGNPVDYSGGRQADDIVNWLKK 474
+ +K + Y ++ +PT FF+ V+Y G D+V++ ++
Sbjct: 335 ---HINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEE 382
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 42.7 bits (96), Expect = 4e-05
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 163 VLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPEY 270
V S F S+V ++V+F+A WCG CK++AP++
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF 40
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 41.5 bits (93), Expect = 1e-04
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 163 VLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPEYANAATKLAEEESPX*NWAKRWMPT 342
V S ++++ +S +V+FYA WCG CK L P KL+E+ N ++
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQ-----NQKASFIAV 72
Query: 343 QWNK--SLPESYGVRGYPTLKFFRNGNPVDYSGGRQADDIVNWLKK 474
+K + + GV PT+ FR G +D G + + L K
Sbjct: 73 NADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAK 118
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 30.3 bits (65), Expect = 0.24
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 76 IKMRVAIFLAITLLGFTLGDEIPTEDNVLVLS-----KSNFDSVVSTTNYIL 216
I + + ++L +T +G + +ED LVLS KS F SVVST N+ L
Sbjct: 428 ITVFIFLYLMLTFIGIIFSTFMTSEDAELVLSYDLMSKSLFISVVSTLNFSL 479
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 617 TALANPRKAFAFSVLWSAKKPNTMTGLAAISSLACSADVTSTA 489
T+ P+KA + W + + + LA+ISS A SA + ST+
Sbjct: 667 TSKPTPKKAASLPQFWLSPRSHNTARLASISSFAKSAVMNSTS 709
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.72
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 349 NKSLPESYGVRGYPTLKFFRNGNPVDYSG--GRQADD---IVNWLKKKTGPPAVEVT 504
+K+L YG + P++ RNG P+ Y R+ D I W+ + P E+T
Sbjct: 340 SKALANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 211 ILVEFYAPWCGHCKSL 258
IL+ FYAPW CK +
Sbjct: 23 ILLNFYAPWAAPCKQM 38
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 26.6 bits (56), Expect = 2.9
Identities = 15/72 (20%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 22 ILLSFVFRVVISDRYWWIIKMRVAIFLAITL---LGFTLGDEIPTEDNVLVLSKSNFDSV 192
+ +SF ++++ +++ +I++ + ++T L + L D+I + N +++KS+ +
Sbjct: 270 VSISFPSKLILKNKHHYILRSLITHSGSVTYGHYLCYRLQDDIWWKANDSLITKSSLNEA 329
Query: 193 VSTTNYILVEFY 228
+S T + FY
Sbjct: 330 LSQTRSACLLFY 341
>SPBC428.03c |pho4||thiamine-repressible acid phosphatase
Pho4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 618 HSTSKSEEGLCFLSALVSKETKYNDRVSSNKLFSLLS*CDFHS 490
+ S + +GLC LSA ++ + N +SN + + S C HS
Sbjct: 416 YGPSGASDGLCELSAYLNSSVRVNS--TSNGIANFNSQCQAHS 456
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 328 RWMPTQWNKSLPESYGVRGYPTLKFFRNGNPVDYSG 435
RW T N ++ Y V+G FF N + V SG
Sbjct: 154 RWNVTNSNVTIEHFYNVKGNVDSLFFLNNDSVAISG 189
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 409 NGNPVDYSGGRQADDIVNWLKKKT 480
N N +D G +Q DD+V+ ++K T
Sbjct: 807 NSNVMDEQGEKQKDDVVDMVRKIT 830
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 203 VVDTTLSKLDLLRTRTLSSVGISSPRVNPRRVI 105
+ TTL LDLL+TR S S P++ RR+I
Sbjct: 27 ISSTTLQPLDLLKTRCQQSQRDSLPKM-VRRII 58
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 25.0 bits (52), Expect = 8.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 100 LAITLLGFTLGDEIPTEDNVLVLSKSNF 183
+AI T+GD IP+ ++L+ K F
Sbjct: 459 IAINAFNETVGDRIPSSKDILITEKIPF 486
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 108 YSQKYCYTHLDDP 70
YS+K Y HLDDP
Sbjct: 61 YSEKILYGHLDDP 73
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 8.9
Identities = 22/98 (22%), Positives = 40/98 (40%)
Frame = +1
Query: 133 DEIPTEDNVLVLSKSNFDSVVSTTNYILVEFYAPWCGHCKSLAPEYANAATKLAEEESPX 312
DE+PTE N L + D VVS ++ + + ++ P + +E E+
Sbjct: 149 DEVPTELNELANEVVDVDDVVSPSSELNAQ-------SVNNILPISDDPKDSTSEAETRD 201
Query: 313 *NWAKRWMPTQWNKSLPESYGVRGYPTLKFFRNGNPVD 426
NW + + N S YG + + NG+ ++
Sbjct: 202 FNWLSKGIVIFPNSSECAFYGNNNDEGMYLYSNGDDLN 239
>SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate
transferase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 453
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -3
Query: 345 LSGHPTFRPVLSXR---FFLCQLSGSISVFWRKRFAVTAPW 232
++ +PTF+PV++ R +++ + ISV+++ T W
Sbjct: 38 IASYPTFKPVVNERCGTWYVNRRHAPISVYFKSTDGHTGQW 78
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,440,873
Number of Sequences: 5004
Number of extensions: 49314
Number of successful extensions: 165
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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