Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_N01
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95956-1|CAA65194.1|  896|Drosophila melanogaster rotated abdome...    29   3.6  
AE014296-1978|AAF50046.2|  886|Drosophila melanogaster CG6097-PA...    29   3.6  
AB176550-1|BAD54754.1|  886|Drosophila melanogaster protein O-ma...    29   3.6  

>X95956-1|CAA65194.1|  896|Drosophila melanogaster rotated abdomen
           protein protein.
          Length = 896

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 336 FFLYHVSNYV*YFCID-VLFLSFYV 407
           FF+ +V +Y+ YFC+D  LFL  Y+
Sbjct: 770 FFMGYVMHYIPYFCVDRTLFLHNYL 794


>AE014296-1978|AAF50046.2|  886|Drosophila melanogaster CG6097-PA
           protein.
          Length = 886

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 336 FFLYHVSNYV*YFCID-VLFLSFYV 407
           FF+ +V +Y+ YFC+D  LFL  Y+
Sbjct: 773 FFMGYVMHYIPYFCVDRTLFLHNYL 797


>AB176550-1|BAD54754.1|  886|Drosophila melanogaster protein
           O-mannosyltransferase 1 protein.
          Length = 886

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 336 FFLYHVSNYV*YFCID-VLFLSFYV 407
           FF+ +V +Y+ YFC+D  LFL  Y+
Sbjct: 773 FFMGYVMHYIPYFCVDRTLFLHNYL 797


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,303,210
Number of Sequences: 53049
Number of extensions: 487264
Number of successful extensions: 988
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)