Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M21
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   4.9  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   8.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   8.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   8.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   8.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   8.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.6  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.6  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.6  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.6  

>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 203 DYVNAKKRDRLYYNLTY 153
           +Y N     +LYYN+ Y
Sbjct: 316 NYYNNNNYKKLYYNINY 332


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 393 NLNQFCFQ*NYLRQV 437
           N  Q C+  NY+ Q+
Sbjct: 98  NYKQLCYNINYIEQI 112


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 393 NLNQFCFQ*NYLRQV 437
           N  Q C+  NY+ Q+
Sbjct: 98  NYKQLCYNINYIEQI 112


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 393 NLNQFCFQ*NYLRQV 437
           N  Q C+  NY+ Q+
Sbjct: 98  NYKQLCYNINYIEQI 112


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 393 NLNQFCFQ*NYLRQV 437
           N  Q C+  NY+ Q+
Sbjct: 98  NYKQLCYNINYIEQI 112


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 393 NLNQFCFQ*NYLRQV 437
           N  Q C+  NY+ Q+
Sbjct: 98  NYKQLCYNINYIEQI 112


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 203 DYVNAKKRDRLYYNLTY 153
           +Y N     +LYYN+ Y
Sbjct: 98  NYNNNNYNKKLYYNINY 114


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 203 DYVNAKKRDRLYYNLTY 153
           +Y N     +LYYN+ Y
Sbjct: 98  NYNNNNYNKKLYYNINY 114


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 203 DYVNAKKRDRLYYNLTY 153
           +Y N     +LYYN+ Y
Sbjct: 98  NYNNNNYNKKLYYNINY 114


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 203 DYVNAKKRDRLYYNLTY 153
           +Y N     +LYYN+ Y
Sbjct: 98  NYNNNNYNKKLYYNINY 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,177
Number of Sequences: 438
Number of extensions: 1947
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)