Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_M19
(503 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 320 4e-88
03_01_0034 + 318432-318825,318902-319851 318 2e-87
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 318 2e-87
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 318 2e-87
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 317 3e-87
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 317 3e-87
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 316 6e-87
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 312 1e-85
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 144 4e-35
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 140 6e-34
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 139 1e-33
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 138 2e-33
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 68 5e-12
08_02_0787 - 21200762-21201142 29 1.6
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 2.1
01_01_0757 - 5840736-5842574 29 2.1
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 2.8
08_02_0709 - 20256705-20257133 28 3.7
04_04_0322 - 24374624-24377698 28 3.7
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 3.7
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 28 4.9
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 28 4.9
07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837 28 4.9
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 4.9
03_01_0104 - 830884-831282,831511-832205,832368-833387,833570-83... 28 4.9
08_02_0951 + 22976130-22977320 27 6.5
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619 27 6.5
01_05_0465 + 22485728-22485835,22486125-22486955 27 6.5
12_02_0447 + 19160178-19160302,19160531-19160813 27 8.6
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 27 8.6
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 320 bits (786), Expect = 4e-88
Identities = 142/165 (86%), Positives = 159/165 (96%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKMAATF+GNST+IQ
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLV+
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 318 bits (780), Expect = 2e-87
Identities = 142/165 (86%), Positives = 157/165 (95%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQ
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 318 bits (780), Expect = 2e-87
Identities = 141/165 (85%), Positives = 158/165 (95%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 277 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 336
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQ
Sbjct: 337 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQ 396
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 397 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 441
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 318 bits (780), Expect = 2e-87
Identities = 141/165 (85%), Positives = 158/165 (95%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQ
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 317 bits (779), Expect = 3e-87
Identities = 140/165 (84%), Positives = 158/165 (95%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 436 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 495
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TF+GNST+IQ
Sbjct: 496 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQ 555
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 556 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 600
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 317 bits (779), Expect = 3e-87
Identities = 141/165 (85%), Positives = 158/165 (95%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQ
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLV+
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 316 bits (776), Expect = 6e-87
Identities = 141/165 (85%), Positives = 158/165 (95%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 256 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQ
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLV+
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 312 bits (765), Expect = 1e-85
Identities = 138/165 (83%), Positives = 156/165 (94%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N++PFPRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYLT +A
Sbjct: 272 NLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASA 331
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL MA+TF+GNST+IQ
Sbjct: 332 MFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQ 391
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E+F+R+SEQFTAMFRR AFLHWYT +GMDEMEFTEAESNMNDLV+
Sbjct: 392 EMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 436
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 144 bits (349), Expect = 4e-35
Identities = 63/168 (37%), Positives = 101/168 (60%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y+
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 318 MYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
I N+TA+ E+F RI +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 378 ISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 140 bits (339), Expect = 6e-34
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 318 MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
I NST++ E+F RI +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 378 ISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 139 bits (336), Expect = 1e-33
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y+
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP ++ A
Sbjct: 318 MYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
I NST++ E+F RI +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 378 ISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 138 bits (334), Expect = 2e-33
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + +VPE+T +F+ ++MA CDPRHG+Y+
Sbjct: 339 NLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCL 398
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMAATF 344
++RG + K+V+ + +I+ + + FV+W P K + PP ++ A
Sbjct: 399 MYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCM 458
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
I N+TA+ E+F RI +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 459 ISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 506
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 67.7 bits (158), Expect = 5e-12
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GR 170
+++P PR HF M G+ PLT R R TV ++ +++ KN+M + R+ +
Sbjct: 259 SLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAK 318
Query: 171 YLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIG 350
Y+++ I +G + +V E + I+ + F+EW P +++ + GL +A
Sbjct: 319 YISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVS-------GLMLA----- 366
Query: 351 NSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGM----DEMEFTEAESNMNDLV 500
N T+I+ LF + Q+ + ++ AFL Y M D EF E+ + LV
Sbjct: 367 NHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLV 420
>08_02_0787 - 21200762-21201142
Length = 126
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 206 HTTAEDGCDGEVAAVTRVTRRHHVLSVE 123
H E G DGE AAVTR+ RR V + E
Sbjct: 99 HQVVEVGDDGEGAAVTRLRRRRMVRTCE 126
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 494 IVHVALRLRELHLVHAIAGVPVQESIASEHSGELFRD-ALEQLLDS 360
+VH A LHLVHA++ V + E S EL D A+E L S
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTS 110
>01_01_0757 - 5840736-5842574
Length = 612
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 279 PNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRNAFLHWYTG 443
PN + +V R + A GNST L I +Q+T ++ N LH Y G
Sbjct: 139 PNGIVWSVSKDVTRYASLLAA--GNSTLAVYLGNLIDDQYTGVYHANITLHLYFG 191
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 502 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 380
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>08_02_0709 - 20256705-20257133
Length = 142
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 341 LHRQLDRYPGAVQAHLGTVHRYVQTQCFLALVHRRWHGRDGVHGGG 478
L R+ + GAV A G HR++ +C RR G HGGG
Sbjct: 82 LRRRTRGHSGAVAAGPGAAHRHLLHRC---SQRRRRRGPGAGHGGG 124
>04_04_0322 - 24374624-24377698
Length = 1024
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = -1
Query: 125 EHLLRELGDGERAVLS-----AATRCERGKSWHKEVE 30
E LLRE+G+ +R VL RC RG W++ +E
Sbjct: 159 ERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALE 195
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 481 LSASVNSISSMPSPVYQCKKALRLNIAVN 395
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 334 AIFSPRGGMSHTAVFTLFGIHSTKYDEFL-FWMLS 233
++F R MS + FG+H T Y E L W +S
Sbjct: 256 SLFQNRPWMSTMISYCFFGLHDTAYSEILSLWAVS 290
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 204 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM---AATFIGNSTAIQEL 374
++MKE+DE++ + +++ Y ++ I N + PR L M A +G + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178
Query: 375 FKRI 386
K +
Sbjct: 179 MKML 182
>07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837
Length = 730
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 273 WIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRN 419
WI N VK + D+P G K+ FI +++ Q+ A ++R+
Sbjct: 568 WITNKVKESWSDVPLHGNKI-EWFINQGDMVKKAIASFPFQYQANYKRS 615
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 502 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 380
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
>03_01_0104 -
830884-831282,831511-832205,832368-833387,833570-833696,
834342-834709,834780-835059,835137-835466
Length = 1072
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 197 AEDGCDGEVAAVTRVTRRHHVLSVEHLL--RELGDGERAVLSAATRCERGKSWHKEVETG 24
A+DG DGE ++ V +V L+ + + D RA+L RGK+W + V
Sbjct: 250 AKDGTDGENYSLCLVDNLLQKPTVHELVEGQAIRDDGRALLDTGIISARGKAWQELVRLA 309
Query: 23 -EGNHV 9
+HV
Sbjct: 310 YSSSHV 315
>08_02_0951 + 22976130-22977320
Length = 396
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 194 EDGCDGEVAAVTRVTRRHHVLSVEHLLRELGDG-ERAVLSAATRC 63
+D D E A + V+R H+L + +R GDG E+ ++ A C
Sbjct: 172 DDDADDEDARLDGVSRLQHLLDLLMQIRPYGDGMEQGLILEAMDC 216
>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
Length = 398
Score = 27.5 bits (58), Expect = 6.5
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Frame = -1
Query: 317 GRDVAHGSLHV-VWDPFHEVRRVLVLDVKHLLIDFLHRHTTAEDGCDGEVAAVTRVTRRH 141
GR +A G + + + E R V D H G + A+ R +RR+
Sbjct: 290 GRRIASGDSYTRAYRRYRERPRRNVTASSVAASDIQHDSANTRRGRVSGIRAIGRTSRRY 349
Query: 140 HVLSVEHLLRELGDGERAVLSAATRCERGKSWH---KEVETGEGNHVPR 3
H + + G +++ A + G+SW+ ++ GN V R
Sbjct: 350 HPVVTHAATEDTGTLQQSYQFVAIEKKFGESWYYFRPKISAVVGNRVRR 398
>01_05_0465 + 22485728-22485835,22486125-22486955
Length = 312
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 255 SSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQEL 374
++YF++ P N DIPP + +I + ++ EL
Sbjct: 99 ATYFIQHRPKNTAADFPDIPPAARESLDAYIAQAVSLAEL 138
>12_02_0447 + 19160178-19160302,19160531-19160813
Length = 135
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 263 LRGMDPKQREDCRVRHPAPRTKDGSNLHRQLDRY 364
L K+R RV PA +DG + H DR+
Sbjct: 10 LGAQQKKRRRSARVSPPATARRDGHHTHGATDRF 43
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 11 HGSLPPSPLLYARICPS 61
HGS+PP PL + +C S
Sbjct: 406 HGSVPPEPLTFRLLCSS 422
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,387,381
Number of Sequences: 37544
Number of extensions: 290424
Number of successful extensions: 1218
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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