Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_M19
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 344 2e-95
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 338 2e-93
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 338 2e-93
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 334 2e-92
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 332 8e-92
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 332 1e-91
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 178 2e-45
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 178 2e-45
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 136 9e-33
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 136 9e-33
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 136 9e-33
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 136 9e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 135 1e-32
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 135 1e-32
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 135 1e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 135 1e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 133 6e-32
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 133 6e-32
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 133 6e-32
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 132 1e-31
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 130 4e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 126 1e-29
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 120 6e-28
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.039
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 35 0.039
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 31 0.36
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 29 1.4
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 29 1.4
AC006708-7|ABM01863.1| 168|Caenorhabditis elegans Hypothetical ... 29 1.9
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 2.5
U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifyi... 29 2.5
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 28 4.4
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 7.7
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 344 bits (846), Expect = 2e-95
Identities = 157/165 (95%), Positives = 164/165 (99%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
NMVPFPRLHFFMPGFAPLTSRGS+QYR+LTVPELTQQMFDAKNMMAACDPRHGRYLTVAA
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KMAATF+GNSTAIQ
Sbjct: 316 MFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
ELFKRISEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 376 ELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 338 bits (830), Expect = 2e-93
Identities = 155/165 (93%), Positives = 161/165 (97%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
NMVPFPRLHFFMPGFAPLTSR ++QYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AA
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
IFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQ
Sbjct: 316 IFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
ELFKRISEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 376 ELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 338 bits (830), Expect = 2e-93
Identities = 155/165 (93%), Positives = 161/165 (97%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
NMVPFPRLHFFMPGFAPLTSR ++QYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AA
Sbjct: 256 NMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
IFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQ
Sbjct: 316 IFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
ELFKRISEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 376 ELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 334 bits (821), Expect = 2e-92
Identities = 151/165 (91%), Positives = 162/165 (98%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
NMVPFPRLHFFMPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA
Sbjct: 256 NMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQ
Sbjct: 316 MFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
ELFKRISEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDL+S
Sbjct: 376 ELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 332 bits (816), Expect = 8e-92
Identities = 150/165 (90%), Positives = 162/165 (98%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
NMVPFPRLHFFMPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA
Sbjct: 256 NMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQ
Sbjct: 316 MFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
ELFKRISEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDL+S
Sbjct: 376 ELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 332 bits (815), Expect = 1e-91
Identities = 150/165 (90%), Positives = 162/165 (98%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
NMVPFPRLHFFMPGFAPL+++G++ YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA
Sbjct: 256 NMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAA 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQ
Sbjct: 316 MFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQ 375
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
ELFKRISEQFTAMFRR AFLHWYTG+GMDEMEFTEAESNMNDLVS
Sbjct: 376 ELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 178 bits (433), Expect = 2e-45
Identities = 84/165 (50%), Positives = 118/165 (71%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N PRLHFFM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A
Sbjct: 255 NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAI 313
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQ
Sbjct: 314 IYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQ 373
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E KRIS+QF +FRR AFLHWYT M+E EFT+AE+ +NDL+S
Sbjct: 374 EPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 178 bits (433), Expect = 2e-45
Identities = 84/165 (50%), Positives = 118/165 (71%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N PRLHFFM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A
Sbjct: 255 NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAI 313
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQ 368
I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQ
Sbjct: 314 IYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQ 373
Query: 369 ELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNMNDLVS 503
E KRIS+QF +FRR AFLHWYT M+E EFT+AE+ +NDL+S
Sbjct: 374 EPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 136 bits (329), Expect = 9e-33
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V
Sbjct: 258 NLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 318 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 136 bits (329), Expect = 9e-33
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V
Sbjct: 257 NLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCL 316
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 317 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 376
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 377 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 424
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 136 bits (329), Expect = 9e-33
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V
Sbjct: 258 NLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 318 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 136 bits (329), Expect = 9e-33
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V
Sbjct: 258 NLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
+FRG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 318 LFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 135 bits (327), Expect = 1e-32
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V
Sbjct: 256 NLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCL 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 135 bits (327), Expect = 1e-32
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V
Sbjct: 256 NLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCL 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 135 bits (327), Expect = 1e-32
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V
Sbjct: 256 NLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCL 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 135 bits (327), Expect = 1e-32
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V
Sbjct: 256 NLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCL 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K + FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 133 bits (322), Expect = 6e-32
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S + AL+V ++T F+ N M CDPR+G+Y+ V
Sbjct: 256 NLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCL 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 133 bits (322), Expect = 6e-32
Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + +TV E+TQQ F+ M CDPR G+Y+
Sbjct: 263 NLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCL 322
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + +++ K S FV+W P K + PP L+ A
Sbjct: 323 LYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCM 382
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 383 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 430
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 133 bits (322), Expect = 6e-32
Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S + AL+V ++T F+ N M CDPR+G+Y+ V
Sbjct: 256 NLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCL 315
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V+ + I+ K S FV+W P K + PP + A
Sbjct: 316 LYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCM 375
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 132 bits (319), Expect = 1e-31
Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + L+V E+T F+ + M CDPR+G+Y+
Sbjct: 258 NLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCL 317
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + KE++ + I+ K + FV+W P K + PP L+ A
Sbjct: 318 LYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCM 377
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAIQE + R+ +F M+ + AF+HWY G+GM+E EF+EA +M
Sbjct: 378 LSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 130 bits (315), Expect = 4e-31
Identities = 60/168 (35%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + + PL S ++ L+V E+T+ F+A N M CDP+HG+Y+ V
Sbjct: 255 NLVPYPRIHFPLVAYNPLISSAHHEF--LSVDEITKSCFEASNQMVKCDPKHGKYMAVCL 312
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATF 344
++RG + K+V + +I+ + S FV+W P K + PP + A
Sbjct: 313 LYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCM 372
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E ++R+ +F M+ + AF+HWY G+GM+E EF+EA ++
Sbjct: 373 LSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 420
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 126 bits (303), Expect = 1e-29
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +APL S + TV ++T F+ M CDPR G+Y+ V
Sbjct: 264 NLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCL 323
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATF 344
++RG + K+++ + ++ K + FVEW P K + PP + +
Sbjct: 324 LYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCM 383
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
I N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA +M
Sbjct: 384 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 431
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 126 bits (303), Expect = 1e-29
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +APL S + TV ++T F+ M CDPR G+Y+ V
Sbjct: 236 NLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCL 295
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATF 344
++RG + K+++ + ++ K + FVEW P K + PP + +
Sbjct: 296 LYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCM 355
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
I N+TAI E + R+ +F M+ + AF+HWY G+GM+E EF+EA +M
Sbjct: 356 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 403
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 120 bits (289), Expect = 6e-28
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA 188
N+VP+PR+HF + +AP+ S + L+V ++T F+ N M CDP G+Y+ V
Sbjct: 261 NLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCL 320
Query: 189 IFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---CDIPPRG-----LKMAATF 344
++RG + K+V+ + +++ K FV+W P K + I G + A
Sbjct: 321 LYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCM 380
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ N+TAI E + R+ +F M+ + AF+HW+ G+GM+E EF EA ++
Sbjct: 381 LSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDL 428
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 55.6 bits (128), Expect = 2e-08
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +3
Query: 345 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGDGMDEMEFTEAESNM 488
+ ++TAI E + R+ +F M+ + AF+HWY G+GM+E EFTEA ++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 60
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.039
Identities = 24/145 (16%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPR---HGRYLT 179
++ PFP +HF +P+ R +V ++T+ + +MM + R + L+
Sbjct: 259 DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLS 318
Query: 180 VAAIFRGRMSMKEV--DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 353
+G++ + EQ ++ + +++ + + K++ + N
Sbjct: 319 AYMFLQGQIEAHTIMTAEQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNN 378
Query: 354 STAIQELFKRISEQFTAMFRRNAFL 428
ST++ LF+ + ++ + + AF+
Sbjct: 379 STSVAPLFESLLSKYDKLRSKRAFI 403
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.039
Identities = 24/145 (16%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +3
Query: 9 NMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPR---HGRYLT 179
++ PFP +HF +P+ R +V ++T+ + +MM + R + L+
Sbjct: 259 DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLS 318
Query: 180 VAAIFRGRMSMKEV--DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGN 353
+G++ + EQ ++ + +++ + + K++ + N
Sbjct: 319 AYMFLQGQIEAHTIMTAEQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNN 378
Query: 354 STAIQELFKRISEQFTAMFRRNAFL 428
ST++ LF+ + ++ + + AF+
Sbjct: 379 STSVAPLFESLLSKYDKLRSKRAFI 403
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 TRNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM-AACDPRHGRYLT 179
T+ M PF LH +P + RG ++LT E+ +Q+ NM+ + + +G+ +
Sbjct: 7 TQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLT--EMHRQLLTKTNMIDSVIETYNGKPIP 64
Query: 180 VAAIFRGRMSMKEVDE 227
A + + +KE DE
Sbjct: 65 AAIEAKKKQIIKERDE 80
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 303 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRNAFLHWYT--GDGMDE 458
C I PR + T I N T +QEL K I E+ R++ + W T D DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 459 MEFTEAESNMNDL 497
E+ + E +++D+
Sbjct: 743 EEWND-EEDLSDV 754
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 303 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRNAFLHWYT--GDGMDE 458
C I PR + T I N T +QEL K I E+ R++ + W T D DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 459 MEFTEAESNMNDL 497
E+ + E +++D+
Sbjct: 743 EEWND-EEDLSDV 754
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +3
Query: 303 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRNAFLHWYT--GDGMDE 458
C I PR + T I N T +QEL K I E+ R++ + W T D DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 459 MEFTEAESNMNDL 497
E+ + E +++D+
Sbjct: 743 EEWND-EEDLSDV 754
>AC006708-7|ABM01863.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A7A.21 protein.
Length = 168
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Frame = -2
Query: 457 SSMPSPVYQCKKALRLNIAVNCSEMRLNSSWIAVELPMKVAAIFSPRGGMSHTAVFTLFG 278
S+ P P ++ K + + A+ ++ S++++ L V + F+P T VF + G
Sbjct: 7 SAFPKPKFEVWKFAKYSSALQI--FQIFGSFVSLVLIGLVGSQFAPTYAALLTCVFAIIG 64
Query: 277 -----------IHSTKYDEFLFWMLSICSSTSFI 209
I+ T+ DE++FW SS SF+
Sbjct: 65 SSVFLLCDVFNINETEPDEWVFWESVFISSFSFL 98
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 15 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHG 167
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 15 VPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHG 167
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 1 protein.
Length = 505
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 293 DCRVRHPAPRTKDGSNLHRQLDRYPGAVQAH--LGTVHRYVQTQCFLA 430
D + P T NL + AV+ H +G HRY+ T+C+LA
Sbjct: 141 DLSLPTPVNHTACVMNLDSVYSSFLFAVETHHTIGYGHRYITTECYLA 188
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -2
Query: 415 RLNIAVNCSEMRLNSSWIAVELPMKVAAIFSPR 317
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = -1
Query: 221 DFLHRHTTAEDGCDGEVAAVTRVTRRHHVLSVEHLLRELGDGERAVLSAATRCERGKSWH 42
D + T E+ DGE R TRRH L + E GDG+ A AAT +
Sbjct: 211 DEKEKSDTIENSGDGETRGKRR-TRRHGKLQPDAPSGEKGDGDAA---AATTDAAPAAEK 266
Query: 41 KEVETGEGNHVP 6
K+ +GN P
Sbjct: 267 KKKRQRKGNKEP 278
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = -1
Query: 221 DFLHRHTTAEDGCDGEVAAVTRVTRRHHVLSVEHLLRELGDGERAVLSAATRCERGKSWH 42
D + T E+ DGE R TRRH L + E GDG+ A AAT +
Sbjct: 211 DEKEKSDTIENSGDGETRGKRR-TRRHGKLQPDAPSGEKGDGDAA---AATTDAAPAAEK 266
Query: 41 KEVETGEGNHVP 6
K+ +GN P
Sbjct: 267 KKKRQRKGNKEP 278
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 177 TVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 275
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 338 NLHRQLDRYPGAVQAHLGTVHRYVQTQCFLALVHRRWHGRDGVHGGGEQHERSR 499
N +DR P + HL H + + R +GRDGVH +QH++ +
Sbjct: 376 NESSDIDRSPASPLRHLQQQHN--KNRSSQKRKGGRVNGRDGVHQPQQQHQQQK 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,181,113
Number of Sequences: 27780
Number of extensions: 215725
Number of successful extensions: 838
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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