Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M17
         (515 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   3.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.1  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   6.1  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   6.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.1  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3

Query: 15  GTRPRSCASTPRSWTSRYRSTLRSPPTAPSSKEKR 119
           G R  SC S P    SR       P + P+SK KR
Sbjct: 265 GGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKR 299


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 29  QLREYATLMDI-KISLDLEIATYRALIEGEEDRLNLTTQSPGR 154
           ++ + AT  D  ++ L  E+A  R   E +E+ +NL  +S G+
Sbjct: 143 KINQMATAPDSHRLKLLREVAGTRVYDERKEESMNLLRESEGK 185


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 76  VERYLDVHERGVLAQLRG 23
           VERYLD    G   QLRG
Sbjct: 250 VERYLDGFRSGFRDQLRG 267


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 76  VERYLDVHERGVLAQLRG 23
           VERYLD    G   QLRG
Sbjct: 250 VERYLDGFRSGFRDQLRG 267


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 391 FLRAIVPNLDELSVGAGFGHLEI 323
           FLR + PN + L+ G+G G  E+
Sbjct: 521 FLRNVPPNYNLLNYGSGGGGAEM 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,889
Number of Sequences: 2352
Number of extensions: 7495
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)