Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_M17
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16275-1|CAA34351.1| 621|Drosophila melanogaster lamin protein. 145 3e-35
X07278-1|CAA30259.1| 622|Drosophila melanogaster protein ( Dros... 145 3e-35
BT001506-1|AAN71261.1| 622|Drosophila melanogaster LD38055p pro... 145 3e-35
AE014134-935|AAF52262.1| 622|Drosophila melanogaster CG6944-PA ... 145 3e-35
L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like p... 139 2e-33
AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p pro... 137 7e-33
AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-P... 137 7e-33
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 136 2e-32
BT016002-1|AAV36887.1| 686|Drosophila melanogaster RE40670p pro... 29 2.8
AE014134-1834|AAF52910.2| 686|Drosophila melanogaster CG5381-PA... 29 2.8
BT023721-1|AAY85121.1| 673|Drosophila melanogaster AT01259p pro... 28 6.5
BT001274-1|AAN71030.1| 669|Drosophila melanogaster AT05655p pro... 28 6.5
AY058790-1|AAL14019.1| 523|Drosophila melanogaster SD09735p pro... 28 6.5
AY051591-1|AAK93015.1| 605|Drosophila melanogaster GH23455p pro... 28 6.5
AE014297-353|AAF51954.1| 669|Drosophila melanogaster CG1193-PB,... 28 6.5
AE014297-352|AAF51955.2| 605|Drosophila melanogaster CG1193-PA,... 28 6.5
AE014134-581|AAF51127.2| 523|Drosophila melanogaster CG3326-PA ... 28 6.5
AE013599-2594|ABC66052.1| 394|Drosophila melanogaster CG33996-P... 28 6.5
>X16275-1|CAA34351.1| 621|Drosophila melanogaster lamin protein.
Length = 621
Score = 145 bits (352), Expect = 3e-35
Identities = 76/163 (46%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 29 QLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXX 208
QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+T +
Sbjct: 377 QLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPAT----NTATVQSFSQSLRNSTR 432
Query: 209 LTPSRRGTPLRAARKRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNNGTK 388
TPSRR RKR ++DESE+ SV DY V+ASAKG++E+ E P+G+FV++ N G++
Sbjct: 433 ATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLFNKGSE 492
Query: 389 ELSLGGYSILR--NAGDQETVFKFHRTVKLEPGAVSTVWSADT 511
E+++GG+ + R N T +KFHR+V++EP V TVWSADT
Sbjct: 493 EVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADT 535
>X07278-1|CAA30259.1| 622|Drosophila melanogaster protein (
Drosophila mRNA fornuclear lamin Dm0. ).
Length = 622
Score = 145 bits (352), Expect = 3e-35
Identities = 76/163 (46%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 29 QLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXX 208
QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+T +
Sbjct: 378 QLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPAT----NTATVQSFSQSLRNSTR 433
Query: 209 LTPSRRGTPLRAARKRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNNGTK 388
TPSRR RKR ++DESE+ SV DY V+ASAKG++E+ E P+G+FV++ N G++
Sbjct: 434 ATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLFNKGSE 493
Query: 389 ELSLGGYSILR--NAGDQETVFKFHRTVKLEPGAVSTVWSADT 511
E+++GG+ + R N T +KFHR+V++EP V TVWSADT
Sbjct: 494 EVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADT 536
>BT001506-1|AAN71261.1| 622|Drosophila melanogaster LD38055p
protein.
Length = 622
Score = 145 bits (352), Expect = 3e-35
Identities = 76/163 (46%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 29 QLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXX 208
QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+T +
Sbjct: 378 QLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPAT----NTATVQSFSQSLRNSTR 433
Query: 209 LTPSRRGTPLRAARKRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNNGTK 388
TPSRR RKR ++DESE+ SV DY V+ASAKG++E+ E P+G+FV++ N G++
Sbjct: 434 ATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLFNKGSE 493
Query: 389 ELSLGGYSILR--NAGDQETVFKFHRTVKLEPGAVSTVWSADT 511
E+++GG+ + R N T +KFHR+V++EP V TVWSADT
Sbjct: 494 EVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADT 536
>AE014134-935|AAF52262.1| 622|Drosophila melanogaster CG6944-PA
protein.
Length = 622
Score = 145 bits (352), Expect = 3e-35
Identities = 76/163 (46%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = +2
Query: 29 QLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXX 208
QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+T +
Sbjct: 378 QLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNITPAT----NTATVQSFSQSLRNSTR 433
Query: 209 LTPSRRGTPLRAARKRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNNGTK 388
TPSRR RKR ++DESE+ SV DY V+ASAKG++E+ E P+G+FV++ N G++
Sbjct: 434 ATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLFNKGSE 493
Query: 389 ELSLGGYSILR--NAGDQETVFKFHRTVKLEPGAVSTVWSADT 511
E+++GG+ + R N T +KFHR+V++EP V TVWSADT
Sbjct: 494 EVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADT 536
>L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like
protein protein.
Length = 621
Score = 139 bits (336), Expect = 2e-33
Identities = 83/180 (46%), Positives = 111/180 (61%), Gaps = 14/180 (7%)
Frame = +2
Query: 11 IRHEAA-QLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXX 187
IR E A QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+ +SPGR
Sbjct: 363 IRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNI--ESPGRPTTDSGISSNG 420
Query: 188 XXXXXXXLTPSRRGTPL--RAA-----------RKRTLLDESEERSVQDYSVTASAKGDL 328
+ S R TP R+A R+RT++DESE+R++ +YSV A+AKGDL
Sbjct: 421 SHLTASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDESEDRTLSEYSVNAAAKGDL 480
Query: 329 EVAEACPDGQFVKIRNNGTKELSLGGYSILRNAGDQETVFKFHRTVKLEPGAVSTVWSAD 508
E+ EA +G+F+K+ N GT+E++L G+ + R AGD+E FKF R K+ GA T+WS D
Sbjct: 481 EIIEADVEGRFIKLHNKGTEEINLTGWQLTRIAGDEELAFKFSRGSKILGGASVTIWSVD 540
>AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p
protein.
Length = 621
Score = 137 bits (332), Expect = 7e-33
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Frame = +2
Query: 23 AAQLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXX 202
A QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+ +SPGR
Sbjct: 368 AHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNI--ESPGRPTTDSGISSNGSHLTA 425
Query: 203 XXLTPSRRGTPL--RAA-----------RKRTLLDESEERSVQDYSVTASAKGDLEVAEA 343
+ S R TP R+A R+RT++DESE+R++ +YSV A+AKGDLE+ EA
Sbjct: 426 SASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDESEDRTLSEYSVNAAAKGDLEIIEA 485
Query: 344 CPDGQFVKIRNNGTKELSLGGYSILRNAGDQETVFKFHRTVKLEPGAVSTVWSAD 508
+G+F+K+ N GT+E++L G+ + R AGD+E FKF R K+ GA T+WS D
Sbjct: 486 DVEGRFIKLHNKGTEEINLTGWQLTRIAGDEELAFKFSRGSKVLGGASVTIWSVD 540
>AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-PA
protein.
Length = 621
Score = 137 bits (332), Expect = 7e-33
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Frame = +2
Query: 23 AAQLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXX 202
A QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+ +SPGR
Sbjct: 368 AHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNI--ESPGRPTTDSGISSNGSHLTA 425
Query: 203 XXLTPSRRGTPL--RAA-----------RKRTLLDESEERSVQDYSVTASAKGDLEVAEA 343
+ S R TP R+A R+RT++DESE+R++ +YSV A+AKGDLE+ EA
Sbjct: 426 SASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDESEDRTLSEYSVNAAAKGDLEIIEA 485
Query: 344 CPDGQFVKIRNNGTKELSLGGYSILRNAGDQETVFKFHRTVKLEPGAVSTVWSAD 508
+G+F+K+ N GT+E++L G+ + R AGD+E FKF R K+ GA T+WS D
Sbjct: 486 DVEGRFIKLHNKGTEEINLTGWQLTRIAGDEELAFKFSRGSKVLGGASVTIWSVD 540
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 136 bits (329), Expect = 2e-32
Identities = 78/175 (44%), Positives = 105/175 (60%), Gaps = 13/175 (7%)
Frame = +2
Query: 23 AAQLREYATLMDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXX 202
A QL+EY LMDIK+SLDLEIA Y L+ GEE RLN+ +SPGR
Sbjct: 368 AHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNI--ESPGRPTTDSGISSNGSHLTA 425
Query: 203 XXLTPSRRGTPL-------------RAARKRTLLDESEERSVQDYSVTASAKGDLEVAEA 343
+ S R TP R+RT++DESE+R++ +YSV A+AKGDLE+ EA
Sbjct: 426 SASSRSGRVTPSGHHSATPGISGSSAVKRRRTVIDESEDRTLSEYSVNAAAKGDLEIIEA 485
Query: 344 CPDGQFVKIRNNGTKELSLGGYSILRNAGDQETVFKFHRTVKLEPGAVSTVWSAD 508
+G+F+K+ N GT+E++L G+ + R AGD+E FKF R K+ GA T+WS D
Sbjct: 486 DVEGRFIKLHNKGTEEINLTGWQLTRIAGDEELAFKFSRGSKVLGGASVTIWSVD 540
>BT016002-1|AAV36887.1| 686|Drosophila melanogaster RE40670p
protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 12 FGTRPRSCASTPRSWTSRYRSTLRSPP 92
F ++P SC S+P S + RYR R+PP
Sbjct: 161 FESQPESCPSSPMS-SRRYRKKRRAPP 186
>AE014134-1834|AAF52910.2| 686|Drosophila melanogaster CG5381-PA
protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 12 FGTRPRSCASTPRSWTSRYRSTLRSPP 92
F ++P SC S+P S + RYR R+PP
Sbjct: 161 FESQPESCPSSPMS-SRRYRKKRRAPP 186
>BT023721-1|AAY85121.1| 673|Drosophila melanogaster AT01259p
protein.
Length = 673
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 336 PKPAPTDSSSRLGTMARRNSASAGIRS--SAMRVTRRRCSSSTAL 464
P PA + + RLG AR ++ +A +R S R+ R+ S++T L
Sbjct: 269 PTPAASMGTMRLGRPARASAMTAALRKSRSVERLRARKLSTNTQL 313
>BT001274-1|AAN71030.1| 669|Drosophila melanogaster AT05655p
protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 336 PKPAPTDSSSRLGTMARRNSASAGIRS--SAMRVTRRRCSSSTAL 464
P PA + + RLG AR ++ +A +R S R+ R+ S++T L
Sbjct: 265 PTPAASMGTMRLGRPARASAMTAALRKSRSVERLRARKLSTNTQL 309
>AY058790-1|AAL14019.1| 523|Drosophila melanogaster SD09735p
protein.
Length = 523
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 329 EVAEACPDGQFVKIRNNGTKELSLGGYS 412
+ ++ P+GQF + RNN TK++ YS
Sbjct: 117 QAVKSRPEGQFPESRNNSTKKIDAQQYS 144
>AY051591-1|AAK93015.1| 605|Drosophila melanogaster GH23455p
protein.
Length = 605
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 336 PKPAPTDSSSRLGTMARRNSASAGIRS--SAMRVTRRRCSSSTAL 464
P PA + + RLG AR ++ +A +R S R+ R+ S++T L
Sbjct: 201 PTPAASMGTMRLGRPARASAMTAALRKSRSVERLRARKLSTNTQL 245
>AE014297-353|AAF51954.1| 669|Drosophila melanogaster CG1193-PB,
isoform B protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 336 PKPAPTDSSSRLGTMARRNSASAGIRS--SAMRVTRRRCSSSTAL 464
P PA + + RLG AR ++ +A +R S R+ R+ S++T L
Sbjct: 265 PTPAASMGTMRLGRPARASAMTAALRKSRSVERLRARKLSTNTQL 309
>AE014297-352|AAF51955.2| 605|Drosophila melanogaster CG1193-PA,
isoform A protein.
Length = 605
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 336 PKPAPTDSSSRLGTMARRNSASAGIRS--SAMRVTRRRCSSSTAL 464
P PA + + RLG AR ++ +A +R S R+ R+ S++T L
Sbjct: 201 PTPAASMGTMRLGRPARASAMTAALRKSRSVERLRARKLSTNTQL 245
>AE014134-581|AAF51127.2| 523|Drosophila melanogaster CG3326-PA
protein.
Length = 523
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 329 EVAEACPDGQFVKIRNNGTKELSLGGYS 412
+ ++ P+GQF + RNN TK++ YS
Sbjct: 117 QAVKSRPEGQFPESRNNSTKKIDAQQYS 144
>AE013599-2594|ABC66052.1| 394|Drosophila melanogaster CG33996-PA
protein.
Length = 394
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 513 FVSADQTVETAPGSSFTVRWNLNTVSWSPALRRI 412
F SAD T +PG TV + T + P++R I
Sbjct: 10 FPSADHTASASPGGGKTVAATMTTPASEPSVRHI 43
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,403,602
Number of Sequences: 53049
Number of extensions: 361720
Number of successful extensions: 1407
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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