Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M16
         (533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   139   5e-35
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.91 
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   1.6  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        24   2.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.8  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   3.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.9  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      23   6.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.4  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  139 bits (337), Expect = 5e-35
 Identities = 63/95 (66%), Positives = 75/95 (78%)
 Frame = +3

Query: 180 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 359
           LFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK 
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKP 96

Query: 360 TAKGLFKILEKYRPETEAVRKERLKTSAXAKLLRK 464
           TA+ + K  +KYRPE    R +RLK  A AK   K
Sbjct: 97  TAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGK 131



 Score = 40.3 bits (90), Expect = 4e-05
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = +2

Query: 431 KDEREXQVAKKDEPPPKRPNTLRAGTNTVTKLVE 532
           K + E + A K+EPP KR N LR G N+V K+VE
Sbjct: 121 KAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVE 154


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 269 YSHPASKGCVTASSQSAAANQPVHP 343
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 258 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 404
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 363 AKGLFKILEKYRPETEAVRKERLKTSAXAKLLRKMSRHR 479
           A G  K   +YRP T A+R+ R    +   L+RK+   R
Sbjct: 30  ATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQR 68


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
 Frame = +2

Query: 374 VQDLGEIQARN*GSQER-----ASKDEREXQVAKKDEPPPKRPNTLRAGTNTV 517
           + D G I++ + G   R     A+K + + Q     +PP K P      +NT+
Sbjct: 283 ISDGGRIRSGDGGRDSRGGGVDAAKKQHQQQQRSSPQPPEKMPRLNPPSSNTI 335


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 396 RPETEAVRKERLKTSAXAKLLRKM 467
           RP+TEA+  E  + S    +LRK+
Sbjct: 266 RPKTEAILVETTEVSTHKDILRKL 289


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 110 DREKSSGRSTCGEES*AQEDCKPS 181
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 390 KYRPETEAVRKERLKTSAXAKLLRKMSRHR 479
           +YRP T A+R+ R    +   L+RK+   R
Sbjct: 41  RYRPGTVALREIRRYQKSTELLIRKLPFQR 70


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 250 SCDGRNIFASSVK--RLCYSVVSKCRRQSTSSPRH*IKPQPKVCSRSWRNTGQKLRQS 417
           S D  ++  + ++  R  + +  + RR    SP H  KP+ +   R W+  GQ L +S
Sbjct: 204 SVDSSSVLGNGIQLHRHQHQLQPQQRRFHRQSPAHRRKPRWRRAGRRWK-VGQFLPES 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,234
Number of Sequences: 2352
Number of extensions: 9394
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)