Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M09
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    23   5.4  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   9.5  

>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 206 VTSRQYIGDPIDCIVDEIPYNVMD 277
           V  R+ IGD   C +D + Y  +D
Sbjct: 491 VPDRELIGDFTKCFIDSMYYTPVD 514


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 208 NEKRKRDQDDHSSFVVQAEHIVV 140
           NE  K  Q  HS    Q EH VV
Sbjct: 219 NESLKSAQQHHSQKQAQQEHTVV 241


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 473 SIGSEERKTGSLERRVRN 420
           SIG E+RK  +L++ +R+
Sbjct: 323 SIGQEQRKLKNLQKSIRD 340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,743
Number of Sequences: 2352
Number of extensions: 8795
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)