Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_M09
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 71 3e-13
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 71 3e-13
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 70 8e-13
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 70 8e-13
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 69 2e-12
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 66 2e-11
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 64 4e-11
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 64 4e-11
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 64 4e-11
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 64 5e-11
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 62 2e-10
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 62 2e-10
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 62 2e-10
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 62 2e-10
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 61 5e-10
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 60 6e-10
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 60 6e-10
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 60 6e-10
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 59 1e-09
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 58 4e-09
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 56 2e-08
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 53 9e-08
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 53 1e-07
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 53 1e-07
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 50 7e-07
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 50 9e-07
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 50 9e-07
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 50 9e-07
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 44 4e-05
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 41 5e-04
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 37 0.007
AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical... 32 0.25
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 29 1.7
U64598-1|AAK39215.2| 330|Caenorhabditis elegans Serpentine rece... 27 7.0
AF016665-5|ABP57825.1| 649|Caenorhabditis elegans Hypothetical ... 27 7.0
Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVM----DTYCWIYSTFT 307
D+ V +L+Y T IL +F+LLV+++QY+G PI C V + M + YCW+ +T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P + +D+ + ++ + YYQWV F+L +A+LFYVP LW+
Sbjct: 199 VP------MQEDIPR------EIYSRRNRQIGYYQWVPFILAIEALLFYVPCILWR 242
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 71.3 bits (167), Expect = 3e-13
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVM----DTYCWIYSTFT 307
D+ V +L+Y T IL +F+LLV+++QY+G PI C V + M + YCW+ +T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P + +D+ + ++ + YYQWV F+L +A+LFYVP LW+
Sbjct: 199 VP------MQEDIPR------EIYSRRNRQIGYYQWVPFILAIEALLFYVPCILWR 242
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 70.1 bits (164), Expect = 8e-13
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVM----DTYCWIYSTFT 307
D+ V RLHY T +++ F++LV+++QY+G PI+C V M + YCW+ +T+
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYW 84
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P +D++ + +D E + YYQWV FVL A+ F++P +W+
Sbjct: 85 VP-------FQDLI-----PHRLDDRERRQIGYYQWVPFVLAVAALTFHIPSSVWR 128
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 70.1 bits (164), Expect = 8e-13
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVM----DTYCWIYSTFT 307
D+ V RLHY T +++ F++LV+++QY+G PI+C V M + YCW+ +T+
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYW 84
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P +D++ + +D E + YYQWV FVL A+ F++P +W+
Sbjct: 85 VP-------FQDLI-----PHRLDDRERRQIGYYQWVPFVLAVAALTFHIPSSVWR 128
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFT 307
D+ + +L+Y T I+ F++LV+++QY+G PI C V E + YCW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P D + A + E + YYQWV FVL +A+LFYVP +W+
Sbjct: 81 LPLH-------DYIPHNYA-----ERENRQIGYYQWVPFVLALEALLFYVPTIVWR 124
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFT 307
D+ + +L+Y T I+ F++LV+++QY+G PI C V E + YCW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P D + A + E + YYQWV FVL +A+LFYVP +W+
Sbjct: 81 LPLH-------DYIPHNYA-----ERENRQIGYYQWVPFVLALEALLFYVPTIVWR 124
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFTIPNRL 322
RL+ + TV+IL S L+ S +IGDPI C + N ++ YC+++ T+ +P
Sbjct: 29 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP--- 85
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+ +A + ++ +V +YYQWV +V QA LFY+PR++WK
Sbjct: 86 --------LDQQLAFEEEERTKVSI-QYYQWVPYVFALQAFLFYIPRFIWK 127
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFTIPNRL 322
RL+ + TV+IL S L+ S +IGDPI C + N ++ YC+++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP--- 59
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+ +A + ++ +V +YYQWV +V QA LFY+PR++WK
Sbjct: 60 --------LDQQLAFEEEERTKVSI-QYYQWVPYVFALQAFLFYIPRFIWK 101
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 64.5 bits (150), Expect = 4e-11
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFT 307
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P + A Y + YYQWV FVL +A+ FY+P +W+
Sbjct: 79 LP----------LTSAFPLEY--GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 64.5 bits (150), Expect = 4e-11
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFT 307
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P + A Y + YYQWV FVL +A+ FY+P +W+
Sbjct: 79 LP----------LTSAFPLEY--GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 64.5 bits (150), Expect = 4e-11
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFT 307
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P + A Y + YYQWV FVL +A+ FY+P +W+
Sbjct: 79 LP----------LTSAFPLEY--GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 64.1 bits (149), Expect = 5e-11
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Frame = +2
Query: 83 MFDVFGSVKGLLKLDTVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDE-- 256
MF + +KGL K D+++ RL+Y T ++L+ F+L ++++QY+G PI C +
Sbjct: 1 MFFLDAFLKGLHKQGD---DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQF 57
Query: 257 --IPYNVMDTYCWIYSTFTI-PNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFV 427
+ YC++ +T+ I P++ + ++D++ + YYQWV F+
Sbjct: 58 TGAWEQYSENYCFVQNTYFISPDKYI------------PDSEIDREGAEIG-YYQWVPFI 104
Query: 428 LFFQAILFYVPRYLWK 475
L QAILFY+P W+
Sbjct: 105 LGLQAILFYLPSLFWR 120
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV-DEIPYN---VMDTYCWIYSTFTI-PNR 319
RL+Y T IL+AFS+L++ +Q+ G PI+C+ ++ P + + YCW T+ + P +
Sbjct: 25 RLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYFVEPTQ 84
Query: 320 LVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
V + K+ Y D+ YYQWV F L QA F P YLWK
Sbjct: 85 DVSLLKKE------ERYTPDRQL----SYYQWVPFFLLLQAAFFRAPSYLWK 126
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EIP---YNVMDTYCWIYSTFT 307
D+ V RL Y T +L FS++V+ +QY+G I C + E + YC+I +TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKT 478
IP R + DV D + E+ YYQWV VL QA +FY+P ++W +
Sbjct: 81 IPER--SEIPGDV-------EDRQKAEI---GYYQWVPIVLAIQAFMFYLPSWIWSS 125
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD-EIP---YNVMDTYCWIYSTFT 307
D+ V RL Y T +L FS++V+ +QY+G I C + E + YC+I +TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKT 478
IP R + DV D + E+ YYQWV VL QA +FY+P ++W +
Sbjct: 81 IPER--SEIPGDV-------EDRQKAEI---GYYQWVPIVLAIQAFMFYLPSWIWSS 125
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 62.1 bits (144), Expect = 2e-10
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD----EIPYNVMDTYCWIYSTFT 307
D+ V RL+Y T +IL L+++++QY G PI+C V+ E +++YCWI +T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
IP + ++V D E K YYQWV F+L +A++F +P W+
Sbjct: 81 IP------MYENVPD------DHTAREEKQIGYYQWVPFILIAEALMFSLPCIFWR 124
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 62.1 bits (144), Expect = 2e-10
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD----EIPYNVMDTYCWIYSTFT 307
D+ V RL+Y T +IL L+++++QY G PI+C V+ E +++YCWI +T+
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 96
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
IP + ++V D E K YYQWV F+L +A++F +P W+
Sbjct: 97 IP------MYENVPD------DHTAREEKQIGYYQWVPFILIAEALMFSLPCIFWR 140
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 60.9 bits (141), Expect = 5e-10
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC-IVDEIP---YNVMDTYCWIYSTFT 307
D ++ RL+Y T ILIAFSLL+ ++ Y+G+P+ C ++ + ++YC+I +T+
Sbjct: 22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTYF 81
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
+P + + + + + E + YYQWV F+L QA+ F VPR W
Sbjct: 82 VP----------MQDSNLPA--AETREGREMIYYQWVPFLLVIQALFFCVPRAFW 124
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 60.5 bits (140), Expect = 6e-10
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 149 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN----VMDTYCWIYSTFTIPN 316
V RLH T +LI ++LV+ +Q+ G P++C+V +I + + YCW T+ +P
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYVPT 81
Query: 317 RLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
VA D+ + YYQWV F L +A F +P LWK
Sbjct: 82 N-----------EPVAGLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLWK 123
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 60.5 bits (140), Expect = 6e-10
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 149 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN----VMDTYCWIYSTFTIPN 316
V RLH T +LI ++LV+ +Q+ G P++C+V +I + + YCW T+ +P
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYVPT 81
Query: 317 RLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
VA D+ + YYQWV F L +A F +P LWK
Sbjct: 82 N-----------EPVAGLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLWK 123
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 60.5 bits (140), Expect = 6e-10
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDE---IPYNVM-DTYCWIYSTFT 307
D+ V RL Y T LI ++LV+ +Q+ G P++C V + + YCW +T+
Sbjct: 56 DDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLECWVPAQFTASWEAYTEMYCWAQNTYW 115
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
+P + +D+ D+ + E + YYQWV F L QA L+Y+P +W+
Sbjct: 116 VP------IDQDI------PVDISEREYRQISYYQWVPFFLLLQAFLYYIPCLMWR 159
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCI-VDEIP---YNVMDTYCWIYSTFT 307
DN R+ + T+ ILI F LV+S G PI C+ + E P N +C+
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFCFYQDKLR 79
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
IP L V + Q + ++ EV YYQW F++F Q + VP +WK
Sbjct: 80 IP-PLHNAVKRSTRQGTMNINNIMPQEVAV-TYYQWTPFIIFLQVAMCLVPALMWK 133
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 57.6 bits (133), Expect = 4e-09
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD----EIPYNVMDTYCWIYSTFTIPNRL 322
R Y+ T +L ++++ + QY+G PI C V +TYC+I T+ +P
Sbjct: 24 RFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAETYCFIKGTYFLPGAF 83
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKTW 481
+ V S D YYQW+ VL QA LFY+P +W+T+
Sbjct: 84 ASEG-----EMSVTSPDDAVTATPQVGYYQWIPIVLVLQAFLFYLPSIIWRTF 131
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 55.6 bits (128), Expect = 2e-08
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFTI-PNR 319
RL+Y + +I++ SL +T+RQY+G P+ C V + + YC++Y+T+ + PN
Sbjct: 22 RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQFTKAWEQYAEDYCFVYNTYWVKPN- 80
Query: 320 LVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
D V V V Q + YYQW F++ +A FY+P W
Sbjct: 81 -------DKVPLTVEE-RVSQQLI----YYQWAPFIMAIEAAFFYLPVIFW 119
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 55.6 bits (128), Expect = 2e-08
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPYNVMDTYCWIYSTFTI-PNR 319
RL+Y + +I++ SL +T+RQY+G P+ C V + + YC++Y+T+ + PN
Sbjct: 22 RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQFTKAWEQYAEDYCFVYNTYWVKPN- 80
Query: 320 LVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
D V V V Q + YYQW F++ +A FY+P W
Sbjct: 81 -------DKVPLTVEE-RVSQQLI----YYQWAPFIMAIEAAFFYLPVIFW 119
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 53.2 bits (122), Expect = 9e-08
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 149 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN-----VMDTYCWIYSTFTIP 313
V +L+Y AT I L+ S +T ++G PIDC +D YC++ +TF +P
Sbjct: 20 VDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWAEYALD-YCYVQNTFFVP 78
Query: 314 ---NRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 475
++ + + A + + YYQWV F+L QA+LFY P +W+
Sbjct: 79 FSEDKAERSYNWEQLVADKQN-TTSLKQTNQIGYYQWVPFILALQAMLFYFPVVIWR 134
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +2
Query: 143 NNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVMDTY----CWIYSTFTI 310
+ + R++ T +L+A +L ++ +QY G PI C D Y C+I +T+ +
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
Query: 311 PNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
PN G D + G ++ YY+WV VL FQA +F +P +LW
Sbjct: 86 PN---GTEVTDEARGG-----------RHINYYRWVPLVLLFQAAMFVLPYHLW 125
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 52.8 bits (121), Expect = 1e-07
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Frame = +2
Query: 149 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD----EIPYNVMDTYCWIYSTFTIP- 313
V +H T +L+ ++L++ +Q+ G PI+C+V + YCW T+ IP
Sbjct: 22 VASIHSFLTSNLLVGLAVLISWKQFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFIPF 81
Query: 314 -NRLVGRV--GKDVVQAGVASYDVDQDEVKYHK------YYQWVCFVLFFQAILFYVPRY 466
LV +V DVV G+ + K YYQW+ F L F+A F +P +
Sbjct: 82 TEELVEQVVDPADVVADGITIGNGGNRPRFVKKGGEKISYYQWMSFFLLFEAACFRLPCF 141
Query: 467 LWK 475
+WK
Sbjct: 142 IWK 144
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +2
Query: 143 NNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVMDTY----CWIYSTFTI 310
+ + R++ T +L+A +L ++ +QY G PI C D Y C+I +T+ +
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
Query: 311 PNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
PN G D + G ++ YY+WV VL FQA +F +P +LW
Sbjct: 86 PN---GTEVTDEARGG-----------RHINYYRWVPLVLLFQAAMFVLPYHLW 125
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 50.4 bits (115), Expect = 7e-07
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Frame = +2
Query: 92 VFGSVKGLLKLDTVCIDNNVF-RLHYKATVIILIAFSLLVTSRQYIGDPIDC-IVDEIPY 265
VF + G L D+++F RLHY T L+ ++L++ + + G PI+C + E
Sbjct: 28 VFAEIVGTLSFLQPQADDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIECWLPAEYKS 87
Query: 266 NVMD---TYCWIYSTFTIPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFF 436
+ D YCW +T+ V D + +V E YYQWV F L +
Sbjct: 88 SWEDYTEMYCWARNTY------VTAFEDDNLP------EVVNREYTMVSYYQWVPFFLVY 135
Query: 437 QAILFYVPRYLWK 475
A FY P +W+
Sbjct: 136 VAFSFYAPCLIWR 148
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 50.0 bits (114), Expect = 9e-07
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN----VMDTYCWIYSTFTIPNRL 322
RL Y TV +L + + + ++QY+G I C + ++YC I +T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
G + E K KYYQWV F+LF A++ Y+PR +W
Sbjct: 83 SNLPGPAI------------RENKELKYYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 50.0 bits (114), Expect = 9e-07
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN----VMDTYCWIYSTFTIPNRL 322
RL Y TV +L + + + ++QY+G I C + ++YC I +T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
G + E K KYYQWV F+LF A++ Y+PR +W
Sbjct: 83 SNLPGPAI------------RENKELKYYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 50.0 bits (114), Expect = 9e-07
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN----VMDTYCWIYSTFTIPNRL 322
RL Y TV +L + + + ++QY+G I C + ++YC I +T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
G + E K KYYQWV F+LF A++ Y+PR +W
Sbjct: 83 SNLPGPAI------------RENKELKYYQWVPFILFGLAVVIYIPRVIW 120
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 44.4 bits (100), Expect = 4e-05
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPY--NVMDTYCWIYSTFTIPN 316
RLH TV +L F LL ++Q+ G+PIDC++ D++ + + +C Y TF
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYD- 84
Query: 317 RLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
V G + + ++ + YYQWV F FQ F +P + W
Sbjct: 85 ----------VSNGTSEFGSYTEDASVN-YYQWVPFFFAFQVCCFLLPFWCW 125
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 44.4 bits (100), Expect = 4e-05
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +2
Query: 155 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV----DEIPY--NVMDTYCWIYSTFTIPN 316
RLH TV +L F LL ++Q+ G+PIDC++ D++ + + +C Y TF
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYD- 84
Query: 317 RLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
V G + + ++ + YYQWV F FQ F +P + W
Sbjct: 85 ----------VSNGTSEFGSYTEDASVN-YYQWVPFFFAFQVCCFLLPFWCW 125
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 40.7 bits (91), Expect = 5e-04
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +2
Query: 140 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVD---EIPYNVMDT-YCWIYSTFT 307
D+ + RL+++ + + +L++ Y G I C + +N T YC I +T+
Sbjct: 18 DDFIDRLNFQYSAYVFALSALVIGYHTYFGRAISCWTPAEFKGGWNEYTTDYCLIENTYY 77
Query: 308 IPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKT 478
+P + Y E K YYQWV F+L F A LFY+P W T
Sbjct: 78 VP--------LEDPNMPPERY----REEKELSYYQWVQFILVFLAFLFYLPYLYWST 122
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.004
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Frame = +2
Query: 122 LDTVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYN----VMDTYCW 289
L ID+ L T + I ++L +++ Y+G ++C + + + YC+
Sbjct: 14 LGITAIDDASDTLSCLITAFLFITAAILTSAKTYVGSAMECWLPQTYSGDWGEFAENYCF 73
Query: 290 IYSTFTIPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYL 469
+ T+ P Q + + E YYQW L I F +P++L
Sbjct: 74 LKDTYFYPR-----------QQSMTDIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFL 122
Query: 470 WK 475
W+
Sbjct: 123 WR 124
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Frame = +2
Query: 122 LDTVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVMD----TYCW 289
L ID+ L T + I ++L +++ Y+G ++C + + + YC+
Sbjct: 14 LGITAIDDASDTLSCLITAFLFIIAAILTSAQSYVGSAMECWLPQTYSGAWEEFAENYCF 73
Query: 290 IYSTFTIPNRLVGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYL 469
+ T+ P Q + + E YYQW L I F +P+++
Sbjct: 74 LKDTYFYPR-----------QQSMTDIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFI 122
Query: 470 WK 475
W+
Sbjct: 123 WR 124
>AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical
protein Y25C1A.4 protein.
Length = 533
Score = 31.9 bits (69), Expect = 0.25
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 312 PTGSSAASGRTSCRRVSPPTMSTRTKLNTTSTISGFVS 425
PTGS+AA G T+ T ST +T ST++G S
Sbjct: 98 PTGSTAAGGSTASTAAGGSTASTAAGGSTASTVAGATS 135
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 315 TGSSAASGRTSCRRVSPPTMSTRTKLNTTSTISGFVSYSS 434
T SS+ TSC + T + R K T STIS F + S
Sbjct: 126 TSSSSMEASTSCTFPARQTKTKRHKRKTYSTISSFAPHHS 165
>U64598-1|AAK39215.2| 330|Caenorhabditis elegans Serpentine
receptor, class v protein6 protein.
Length = 330
Score = 27.1 bits (57), Expect = 7.0
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +2
Query: 158 LHYKATVIILIAFSLLVTSRQY-----IGDPIDCIVDEIPYNVMDTYCWIYSTFTIPNRL 322
L + A ++ I FS+ + R+Y + +P + IP + + +I I L
Sbjct: 45 LQFYAELVFFIEFSITMRFRKYTDFYMLFEPDTVFIGIIPRIISGIHYYIKLVVYI-GYL 103
Query: 323 VGRVGKDVVQAGVASYDVDQDEVKYHKYYQWVCFVLFFQAILFYVPRYLW 472
V + V+SYD D V K Q + V + IL +P + W
Sbjct: 104 FFAVNRLFTALMVSSYDKDNISVWGTKTLQRIAIVQWSIPILGLLPTHAW 153
>AF016665-5|ABP57825.1| 649|Caenorhabditis elegans Hypothetical
protein C49D10.4 protein.
Length = 649
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 284 CWIYSTFTIPNRLVGRVGKDVVQAGVASYD---VDQDEVKYHKYYQWVCFVLFFQAILF 451
C ++S + P ++ V +V G SY + Y K+Y F+++F AI+F
Sbjct: 258 CMVFSPWPFPGDILRVVRNALVYLGDVSYSLYLIHWPVFVYVKHYYGEQFLVYFLAIIF 316
>Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical
protein T15D6.5 protein.
Length = 376
Score = 26.6 bits (56), Expect = 9.3
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +2
Query: 95 FGSVKGLLKLDTVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPYNVM 274
FG + + + I N RL KAT+I+++ F ++ Q PI +++E
Sbjct: 26 FGKMLETFRFHSTMIRNCTKRLTLKATIIVVVLFYWVLLQNQEA--PISELLEE----RC 79
Query: 275 DTYCWIYST 301
D W YST
Sbjct: 80 DRSGWNYST 88
>AC084155-7|AAG23366.3| 1061|Caenorhabditis elegans Hypothetical
protein Y45G5AM.2 protein.
Length = 1061
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 306 LFPTGSSAASGRTSCRRVSPPTMSTRTKLNT-TSTISGFVSYSSFKRSCFTFLATYGKR 479
+F TGS G T+C R + T +N T + G + +S + F TYG R
Sbjct: 855 MFQTGSHYTDGATNCARTIWDSYPTEEFMNQYTLVLKGHIRLAS---ASFPKTLTYGSR 910
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,637,711
Number of Sequences: 27780
Number of extensions: 183218
Number of successful extensions: 808
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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