Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M07
         (347 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089481-1|AAL90219.1|  476|Drosophila melanogaster AT29994p pro...    28   3.7  
AF199485-1|AAF13273.1|  476|Drosophila melanogaster sugar transp...    28   3.7  
AE013599-584|AAF59139.1|  476|Drosophila melanogaster CG17976-PA...    28   3.7  

>AY089481-1|AAL90219.1|  476|Drosophila melanogaster AT29994p
           protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 185 SLSQCLC--MIKLPKLFIVCSFQLISGMAEPILT*FFLSVAEVTPRNF 48
           ++ Q LC   +KLP LFIVCSF  +  M+  I   +F S+   T   F
Sbjct: 256 TMKQVLCNSKLKLP-LFIVCSFHFVQQMS-GISAIWFYSIEIFTQSGF 301


>AF199485-1|AAF13273.1|  476|Drosophila melanogaster sugar
           transporter 3 protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 185 SLSQCLC--MIKLPKLFIVCSFQLISGMAEPILT*FFLSVAEVTPRNF 48
           ++ Q LC   +KLP LFIVCSF  +  M+  I   +F S+   T   F
Sbjct: 256 TMKQVLCNSKLKLP-LFIVCSFHFVQQMS-GISAIWFYSIEIFTQSGF 301


>AE013599-584|AAF59139.1|  476|Drosophila melanogaster CG17976-PA
           protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 185 SLSQCLC--MIKLPKLFIVCSFQLISGMAEPILT*FFLSVAEVTPRNF 48
           ++ Q LC   +KLP LFIVCSF  +  M+  I   +F S+   T   F
Sbjct: 256 TMKQVLCNSKLKLP-LFIVCSFHFVQQMS-GISAIWFYSIEIFTQSGF 301


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,115,519
Number of Sequences: 53049
Number of extensions: 250513
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)