Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M05
         (271 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   0.29 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   1.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   1.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    19   8.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   8.2  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 0.29
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 141 NYFIVFLLLYTM*YNYFMEKNITRNYR 61
           NY   F+L+ T+ + YF E +I ++ R
Sbjct: 4   NYHFFFILVITLIFLYFGEADIKKDCR 30


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 216 TECFITSSLILTYYVGLVFFLL 151
           T+ F+T   I  Y + L+F +L
Sbjct: 217 TKVFVTCIFIWAYVIPLIFIIL 238


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 216 TECFITSSLILTYYVGLVFFLL 151
           T+ F+T   I  Y + L+F +L
Sbjct: 217 TKVFVTCIFIWAYVIPLIFIIL 238


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 62  ERHMNSLHFLVFGLCI 15
           +RHM +    V+G C+
Sbjct: 210 QRHMGNFLIQVYGPCV 225


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 8.2
 Identities = 7/35 (20%), Positives = 19/35 (54%)
 Frame = -1

Query: 256 IMGSFQRSKH*CVDRMLYNVVAHFDLLRRISFFFI 152
           ++G F R+ +  + +  YN+ + + +   +  FF+
Sbjct: 175 LLGCFPRATNRDIKKCSYNMDSSYVIFSAMGSFFL 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,444
Number of Sequences: 438
Number of extensions: 1220
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5138079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)