SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_M01
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical ...    61   4e-10
AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical ...    53   1e-07
U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    52   3e-07
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    52   3e-07
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    52   3e-07
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    35   0.038
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    33   0.12 
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     33   0.12 
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    30   0.82 
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    30   0.82 
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    30   0.82 
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    30   1.1  
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    30   1.1  
U88178-6|ABA03112.1|  312|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U67967-1|AAC47829.1|  413|Caenorhabditis elegans PTL-1B protein ...    29   1.4  
U67966-1|AAB97090.1|  453|Caenorhabditis elegans PTL-1A protein ...    29   1.4  
U39650-4|AAK39186.1|  944|Caenorhabditis elegans Apical junction...    29   1.4  
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction...    29   1.4  
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction...    29   1.4  
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction...    29   1.4  
U38983-1|AAA80687.1|  436|Caenorhabditis elegans TAU-1b protein.       29   1.4  
U38982-1|AAA80686.1|  431|Caenorhabditis elegans TAU-1a protein.       29   1.4  
U00051-5|AAM29696.1|  252|Caenorhabditis elegans Protein with ta...    29   1.4  
U00051-4|AAK70645.1|  453|Caenorhabditis elegans Protein with ta...    29   1.4  
U00051-3|AAK70647.1|  413|Caenorhabditis elegans Protein with ta...    29   1.4  
U00051-2|AAK70646.1|  458|Caenorhabditis elegans Protein with ta...    29   1.4  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   3.3  
U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division c...    28   3.3  
AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14 phosph...    28   3.3  
AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein phosp...    28   3.3  
Z81564-6|CAB04572.1|  678|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore co...    28   4.4  
L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical pr...    28   4.4  
L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF016853-1|AAB94552.1|  678|Caenorhabditis elegans HMP-2 protein.      28   4.4  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    27   5.8  
U13644-9|AAB52680.3|  492|Caenorhabditis elegans Cell death abno...    27   5.8  
AF125972-1|AAD14770.2|  349|Caenorhabditis elegans Hypothetical ...    27   5.8  
AF061513-1|AAC24362.1|  492|Caenorhabditis elegans candidate ada...    27   5.8  
Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AF016672-8|AAB66117.4|  998|Caenorhabditis elegans Jnk interacti...    27   7.6  
AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    27   7.6  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    27   7.6  
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so...    27   7.6  

>AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical
           protein Y51F10.8 protein.
          Length = 204

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
 Frame = -1

Query: 353 AMERAMLGVTLRE-RIRN----EIWRRTKITDIARRIAKLKL*WAGHIACRTDARWGQRV 189
           A+ER ++G+TL E R RN    E+  ++K+ D    I K KL WAGH+A RTD RW   +
Sbjct: 82  ALERKLVGLTLTEQRERNIHREEVREKSKLRDPLIHIKKRKLGWAGHVARRTDGRWTTLM 141

Query: 188 LEWLPRTGRRSVG 150
            +W PR  +R VG
Sbjct: 142 NDWCPRDEKRPVG 154


>AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical
           protein Y32G9A.9 protein.
          Length = 417

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
 Frame = -1

Query: 353 AMERAMLGVTL---RERI--RNEIWRRTKITDIARRIAKLKL*WAGHIACRTDARWGQRV 189
           ++ER ++G+TL   RER   R +I + + + D    + K KL WAGH+A R D RW   +
Sbjct: 297 SLERRLVGITLTQQRERDLHREDIRKMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 356

Query: 188 LEWLPRTGRRSVG 150
            EW P   +R VG
Sbjct: 357 TEWRPYGWKRPVG 369


>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
 Frame = -1

Query: 353 AMERAMLGVTL---RERI--RNEIWRRTKITDIARRIAKLKL*WAGHIACRTDARWGQRV 189
           ++ER ++G+TL   RER   R +I   + + D    + K KL WAGH+A R D RW   +
Sbjct: 771 SLERRLVGITLTQQRERDLHREDIRTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 830

Query: 188 LEWLPRTGRRSVG 150
            EW P   +R VG
Sbjct: 831 TEWRPYGWKRPVG 843


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
            transcriptase protein.
          Length = 1066

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
 Frame = -1

Query: 353  AMERAMLGVTL---RERI--RNEIWRRTKITDIARRIAKLKL*WAGHIACRTDARWGQRV 189
            ++ER ++G+TL   RER   R +I   + + D    + K KL WAGH+A R D RW   +
Sbjct: 946  SLERRLVGITLTQQRERDLHREDIRTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 1005

Query: 188  LEWLPRTGRRSVG 150
             EW P   +R VG
Sbjct: 1006 TEWRPYGWKRPVG 1018


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
 Frame = -1

Query: 353 AMERAMLGVTL---RERI--RNEIWRRTKITDIARRIAKLKL*WAGHIACRTDARWGQRV 189
           ++ER ++G+TL   RER   R +I   + + D    + K KL WAGH+A R D RW   +
Sbjct: 685 SLERRLVGITLTQQRERDLHREDIRTMSLVRDPLNFVKKRKLGWAGHVARRKDGRWTTLM 744

Query: 188 LEWLPRTGRRSVG 150
            EW P   +R VG
Sbjct: 745 TEWRPYGWKRPVG 757


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 34.7 bits (76), Expect = 0.038
 Identities = 28/83 (33%), Positives = 40/83 (48%)
 Frame = +3

Query: 45   TSTAGHKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSAS 224
            +S++   S  +SP  P    S  P P+P + ST    +T++G      +   PS IGS  
Sbjct: 1253 SSSSPVPSTSQSPN-PSTSGSSTPTPNPSQ-STSPVVSTTTGEMTSHGSTQTPSTIGST- 1309

Query: 225  NVPSPLQLKFSNSSGNVGYFGSS 293
             V  P  +  SNSSG+    GSS
Sbjct: 1310 -VTQPSTVSGSNSSGSTVTIGSS 1331



 Score = 28.7 bits (61), Expect = 2.5
 Identities = 24/82 (29%), Positives = 37/82 (45%)
 Frame = +3

Query: 33  LNRKTSTAGHKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI 212
           L   T+T G  S   S   P   S     P+P+  ST  +  TSS +  P  NP + +  
Sbjct: 577 LASSTATPGSSSTVPSSSSPQPSSQS---PAPNTGSTTPSQ-TSSQSPSPSMNPSSSTPT 632

Query: 213 GSASNVPSPLQLKFSNSSGNVG 278
           GS+ +  +P     S+ +G+ G
Sbjct: 633 GSSQSTITPEGSTASSPTGSTG 654


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 108 GFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI-GSASNVPSPLQLKF--SNSSGNVG 278
           GFP   P     +   A S+G W P  NP  P+ +  S    P    L F  S+S     
Sbjct: 264 GFPEKYPRYNDCIHLAACSAGQWLPMSNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDE 323

Query: 279 YFGSSPDLIPDSFAQ 323
           Y  +  D+IP + A+
Sbjct: 324 YPENILDMIPGNLAE 338


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 108 GFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI-GSASNVPSPLQLKF--SNSSGNVG 278
           GFP   P     +   A S+G W P  NP  P+ +  S    P    L F  S+S     
Sbjct: 264 GFPEKYPRYNDCIHLAACSAGQWLPMSNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDE 323

Query: 279 YFGSSPDLIPDSFAQ 323
           Y  +  D+IP + A+
Sbjct: 324 YPENILDMIPGNLAE 338


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 108 GFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI-GSASNVPSPLQLKF--SNSSGNVG 278
           GFP   P     +   A S+G W P  NP  P+ +  S    P    L F  S+S     
Sbjct: 264 GFPEKYPRYNDCIHLAACSAGQWLPMSNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDE 323

Query: 279 YFGSSPDLIPDSFAQ 323
           Y  +  D+IP + A+
Sbjct: 324 YPENILDMIPGNLAE 338


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 108 GFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI-GSASNVPSPLQLKF--SNSSGNVG 278
           GFP   P     +   A S+G W P  NP  P+ +  S    P    L F  S+S     
Sbjct: 264 GFPEKYPRYNDCIHLAACSAGQWLPMSNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDE 323

Query: 279 YFGSSPDLIPDSFAQ 323
           Y  +  D+IP + A+
Sbjct: 324 YPENILDMIPGNLAE 338


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 108 GFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI-GSASNVPSPLQLKF--SNSSGNVG 278
           GFP   P     +   A S+G W P  NP  P+ +  S    P    L F  S+S     
Sbjct: 288 GFPEKYPRYNDCIHLAACSAGQWLPMSNPHLPADLFTSCLTTPIRTSLAFHLSHSEHRDE 347

Query: 279 YFGSSPDLIPDSFAQ 323
           Y  +  D+IP + A+
Sbjct: 348 YPENILDMIPGNLAE 362


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGF--PRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVP 233
           H+ P  SP   P+++     P P+  R     T   S G+  P   P  PS + SA   P
Sbjct: 104 HQPPSFSPATQPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAP 163

Query: 234 SP 239
            P
Sbjct: 164 FP 165


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = +3

Query: 78  SPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVP--SPLQLK 251
           +PQ PP  S   P P+    S     A+++  +     P AP     A   P  S   L 
Sbjct: 481 APQSPPTPSPADPGPTTSSSSLTQDPASNATGFSDVPAPQAPPTPSPADPGPTTSSSSLT 540

Query: 252 FSNSSGNVGYFGSSPDLIPDSFAQ 323
              +S   G+ GSSP   P+SF +
Sbjct: 541 QDPASNATGFSGSSP---PNSFEE 561


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = +3

Query: 78  SPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVP--SPLQLK 251
           +PQ PP  S   P P+    S     A+++  +     P AP     A   P  S   L 
Sbjct: 481 APQSPPTPSPADPGPTTSSSSLTQDPASNATGFSDVPAPQAPPTPSPADPGPTTSSSSLT 540

Query: 252 FSNSSGNVGYFGSSPDLIPDSFAQ 323
              +S   G+ GSSP   P+SF +
Sbjct: 541 QDPASNATGFSGSSP---PNSFEE 561


>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
           cycle related protein14, isoform b protein.
          Length = 1063

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +3

Query: 87  RPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSPLQLKFSNSS 266
           RPP  +S     SP   ST   ++TSS      K PLA   + S S +PS    +  + +
Sbjct: 623 RPPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSV-STSTLPSMYMTRKMSEN 681

Query: 267 GNV 275
           G V
Sbjct: 682 GAV 684


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
           phosphatase isoform B protein.
          Length = 1063

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 21/63 (33%), Positives = 29/63 (46%)
 Frame = +3

Query: 87  RPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSPLQLKFSNSS 266
           RPP  +S     SP   ST   ++TSS      K PLA   + S S +PS    +  + +
Sbjct: 623 RPPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSV-STSTLPSMYMTRKMSEN 681

Query: 267 GNV 275
           G V
Sbjct: 682 GAV 684


>U88178-6|ABA03112.1|  312|Caenorhabditis elegans Hypothetical
           protein W09C3.8 protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = -1

Query: 239 WAGHIACRTDARWGQRVLEWLP---RTGRRSVGGQ 144
           +AGHI  R   RW +   EW P   +  +R+VGGQ
Sbjct: 216 FAGHILRRDPNRWTKICTEWDPSHNKNWKRAVGGQ 250


>U67967-1|AAC47829.1|  413|Caenorhabditis elegans PTL-1B protein
           protein.
          Length = 413

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 200 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 252

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 253 RPISKMSRERSDV 265


>U67966-1|AAB97090.1|  453|Caenorhabditis elegans PTL-1A protein
           protein.
          Length = 453

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 200 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 252

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 253 RPISKMSRERSDV 265


>U39650-4|AAK39186.1|  944|Caenorhabditis elegans Apical junction
           molecule protein1, isoform b protein.
          Length = 944

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 8/140 (5%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQR--------SPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKN 191
           N  T+T  H +P+         +P+ P +L SG  +P P   S L+   T+S    P  +
Sbjct: 43  NTTTTTTTHYAPKTWNDPSITTAPKIPVSLLSG-AQPLP---SVLTQRTTTSSYSAPNYS 98

Query: 192 PLAPSGIGSASNVPSPLQLKFSNSSGNVGYFGSSPDLIPDSFAQCNSKHSSLHCPLRSFA 371
             + SG+ S    P PL +   +SS    Y       I  S +       S H   RS  
Sbjct: 99  ASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTV 158

Query: 372 IALCKENAK*TACLYTYLFK 431
             +    A  TA  ++ +F+
Sbjct: 159 REIPVHRAPSTAPSHSSVFE 178


>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
           molecule protein1, isoform c protein.
          Length = 1148

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 8/140 (5%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQR--------SPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKN 191
           N  T+T  H +P+         +P+ P +L SG  +P P   S L+   T+S    P  +
Sbjct: 43  NTTTTTTTHYAPKTWNDPSITTAPKIPVSLLSG-AQPLP---SVLTQRTTTSSYSAPNYS 98

Query: 192 PLAPSGIGSASNVPSPLQLKFSNSSGNVGYFGSSPDLIPDSFAQCNSKHSSLHCPLRSFA 371
             + SG+ S    P PL +   +SS    Y       I  S +       S H   RS  
Sbjct: 99  ASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTV 158

Query: 372 IALCKENAK*TACLYTYLFK 431
             +    A  TA  ++ +F+
Sbjct: 159 REIPVHRAPSTAPSHSSVFE 178


>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
           molecule protein1, isoform d protein.
          Length = 1439

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 8/140 (5%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQR--------SPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKN 191
           N  T+T  H +P+         +P+ P +L SG  +P P   S L+   T+S    P  +
Sbjct: 43  NTTTTTTTHYAPKTWNDPSITTAPKIPVSLLSG-AQPLP---SVLTQRTTTSSYSAPNYS 98

Query: 192 PLAPSGIGSASNVPSPLQLKFSNSSGNVGYFGSSPDLIPDSFAQCNSKHSSLHCPLRSFA 371
             + SG+ S    P PL +   +SS    Y       I  S +       S H   RS  
Sbjct: 99  ASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTV 158

Query: 372 IALCKENAK*TACLYTYLFK 431
             +    A  TA  ++ +F+
Sbjct: 159 REIPVHRAPSTAPSHSSVFE 178


>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
           molecule protein1, isoform a protein.
          Length = 1480

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 8/140 (5%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQR--------SPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKN 191
           N  T+T  H +P+         +P+ P +L SG  +P P   S L+   T+S    P  +
Sbjct: 43  NTTTTTTTHYAPKTWNDPSITTAPKIPVSLLSG-AQPLP---SVLTQRTTTSSYSAPNYS 98

Query: 192 PLAPSGIGSASNVPSPLQLKFSNSSGNVGYFGSSPDLIPDSFAQCNSKHSSLHCPLRSFA 371
             + SG+ S    P PL +   +SS    Y       I  S +       S H   RS  
Sbjct: 99  ASSMSGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTV 158

Query: 372 IALCKENAK*TACLYTYLFK 431
             +    A  TA  ++ +F+
Sbjct: 159 REIPVHRAPSTAPSHSSVFE 178


>U38983-1|AAA80687.1|  436|Caenorhabditis elegans TAU-1b protein.
          Length = 436

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 178 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 230

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 231 RPISKMSRERSDV 243


>U38982-1|AAA80686.1|  431|Caenorhabditis elegans TAU-1a protein.
          Length = 431

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 178 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 230

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 231 RPISKMSRERSDV 243


>U00051-5|AAM29696.1|  252|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform d protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 52  HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 104

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 105 RPISKMSRERSDV 117


>U00051-4|AAK70645.1|  453|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform a protein.
          Length = 453

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 200 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 252

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 253 RPISKMSRERSDV 265


>U00051-3|AAK70647.1|  413|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform c protein.
          Length = 413

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 200 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 252

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 253 RPISKMSRERSDV 265


>U00051-2|AAK70646.1|  458|Caenorhabditis elegans Protein with
           tau-like repeats protein1, isoform b protein.
          Length = 458

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           HK+PQRS  RPP      P+P P   ++L   AT++    P       +   +AS  PSP
Sbjct: 200 HKTPQRSGIRPPTAILRQPKPIP---ASLPRPATAT----PSSQRAISTPRQTASTAPSP 252

Query: 240 LQL-KFSNSSGNV 275
             + K S    +V
Sbjct: 253 RPISKMSRERSDV 265


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 24/82 (29%), Positives = 37/82 (45%)
 Frame = +3

Query: 33  LNRKTSTAGHKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI 212
           L   T+T G  S   S   P   S     P+P+  ST  +  TSS +  P  NP + +  
Sbjct: 370 LASSTATPGSSSTVPSSSSPQPSSQS---PAPNTGSTTPSQ-TSSQSPSPSMNPSSSTPT 425

Query: 213 GSASNVPSPLQLKFSNSSGNVG 278
           GS+ +  +P     S+ +G+ G
Sbjct: 426 GSSQSTITPEGSTASSPTGSTG 447


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 24/82 (29%), Positives = 37/82 (45%)
 Frame = +3

Query: 33  LNRKTSTAGHKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGI 212
           L   T+T G  S   S   P   S     P+P+  ST  +  TSS +  P  NP + +  
Sbjct: 577 LASSTATPGSSSTVPSSSSPQPSSQS---PAPNTGSTTPSQ-TSSQSPSPSMNPSSSTPT 632

Query: 213 GSASNVPSPLQLKFSNSSGNVG 278
           GS+ +  +P     S+ +G+ G
Sbjct: 633 GSSQSTITPEGSTASSPTGSTG 654


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +3

Query: 66   SPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSPLQ 245
            S  +SP   PA  S  P  S    ST++   +SS     F++P + + IGS++ VPS  Q
Sbjct: 944  SSSQSPTSSPAQQSSTPAGS----STVTVQQSSS-----FQSPQSTTQIGSSTTVPS-TQ 993

Query: 246  LKFSNSSG 269
               S S G
Sbjct: 994  APSSTSGG 1001


>U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division
           cycle related protein14, isoform c protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 87  RPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPS 236
           RPP  +S     SP   ST   ++TSS      K PLA   + S S +PS
Sbjct: 623 RPPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSV-STSTLPS 671


>AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14
           phosphatase isoform C protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 87  RPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPS 236
           RPP  +S     SP   ST   ++TSS      K PLA   + S S +PS
Sbjct: 623 RPPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSV-STSTLPS 671


>AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein
           phosphatase CDC14 protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +3

Query: 87  RPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPS 236
           RPP  +S     SP   ST   ++TSS      K PLA   + S S +PS
Sbjct: 623 RPPPTTSSRAPLSPHNYSTTQGYSTSSRGLYGDKKPLARGSV-STSTLPS 671


>Z81564-6|CAB04572.1|  678|Caenorhabditis elegans Hypothetical
           protein K05C4.6 protein.
          Length = 678

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 61  ISLLKDLHNDPQPYPADSRDLHQIVGPPCPPTLRL 165
           +S L  L N P    A   D+ Q+  P CPP L L
Sbjct: 503 VSALHQLANHPAVAAACCDDIGQVGNPECPPFLDL 537


>U97191-1|AAB52432.1|  805|Caenorhabditis elegans Nuclear pore
           complex protein protein11 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 21/72 (29%), Positives = 29/72 (40%)
 Frame = +3

Query: 93  PALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSPLQLKFSNSSGN 272
           PA S+  P       S  +  A+S G +     P APSG    S  P+      + +SG 
Sbjct: 221 PATSNAAPTSGLFGNSAPAATASSGGLFGAAPKPAAPSGGLFGSTAPATTAATTTATSGL 280

Query: 273 VGYFGSSPDLIP 308
            G   S+P   P
Sbjct: 281 FGAPTSAPSSAP 292


>L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical
           protein F42H10.7b protein.
          Length = 531

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*P 182
           HKSP  SP+    + S + RPS  +RST    A S G+  P
Sbjct: 450 HKSPFASPK----IMSNWSRPSSSKRSTTPGSAWSRGSTTP 486


>L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical
           protein F42H10.7a protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*P 182
           HKSP  SP+    + S + RPS  +RST    A S G+  P
Sbjct: 448 HKSPFASPK----IMSNWSRPSSSKRSTTPGSAWSRGSTTP 484


>AF016853-1|AAB94552.1|  678|Caenorhabditis elegans HMP-2 protein.
          Length = 678

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 61  ISLLKDLHNDPQPYPADSRDLHQIVGPPCPPTLRL 165
           +S L  L N P    A   D+ Q+  P CPP L L
Sbjct: 503 VSALHQLANHPAVAAACCDDIGQVGNPECPPFLDL 537


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQRSPQRPPALSSGFPRPSPD 131
           N  T +     P  S + P A SS FP  +PD
Sbjct: 557 NSSTDSGSTSEPSMSSEAPGASSSDFPSSTPD 588


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQRSPQRPPALSSGFPRPSPD 131
           N  T +     P  S + P A SS FP  +PD
Sbjct: 557 NSSTDSGSTSEPSMSSEAPGASSSDFPSSTPD 588


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQRSPQRPPALSSGFPRPSPD 131
           N  T +     P  S + P A SS FP  +PD
Sbjct: 557 NSSTDSGSTSEPSMSSEAPGASSSDFPSSTPD 588


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 36  NRKTSTAGHKSPQRSPQRPPALSSGFPRPSPD 131
           N  T +     P  S + P A SS FP  +PD
Sbjct: 557 NSSTDSGSTSEPSMSSEAPGASSSDFPSSTPD 588


>U13644-9|AAB52680.3|  492|Caenorhabditis elegans Cell death
           abnormality protein 6 protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +3

Query: 81  PQRPPALSSGFPR----PSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           P  PP+     PR    P  +   TL   +TSS    P  +P + S  G A ++P P
Sbjct: 265 PNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPSIPPP 321


>AF125972-1|AAD14770.2|  349|Caenorhabditis elegans Hypothetical
           protein H25P19.1 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 24/83 (28%), Positives = 34/83 (40%)
 Frame = +3

Query: 48  STAGHKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASN 227
           ST G   P+  P RPP ++  F R +P +  T +   +   +  P K+P   +   S S 
Sbjct: 257 STNGTPMPEPEPSRPPRINLKF-RFTPSKLGTATPGISIISSPTPPKSPPKSTPRTSKST 315

Query: 228 VPSPLQLKFSNSSGNVGYFGSSP 296
            P    LK S      G   S P
Sbjct: 316 PPKRPYLKRSLEQARGGAQKSYP 338


>AF061513-1|AAC24362.1|  492|Caenorhabditis elegans candidate
           adaptor protein CED-6 protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +3

Query: 81  PQRPPALSSGFPR----PSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           P  PP+     PR    P  +   TL   +TSS    P  +P + S  G A ++P P
Sbjct: 265 PNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPSIPPP 321


>Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical
           protein H13N06.2 protein.
          Length = 454

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 21/92 (22%), Positives = 35/92 (38%)
 Frame = +3

Query: 60  HKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSP 239
           H+SP  SP     ++     P P   ST S  +  +    P      P     +S +PS 
Sbjct: 62  HQSPGTSPVTTTPVAPTNSLPMPPGTSTPSLSSAENSGNGPHPPAPPPQSSAESSGLPSS 121

Query: 240 LQLKFSNSSGNVGYFGSSPDLIPDSFAQCNSK 335
            + +   S+ N     S+ +L+     + N K
Sbjct: 122 SEQEEEASAQNTTVPSSTEELMTLGVTETNMK 153


>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
           protein T23F1.5 protein.
          Length = 1262

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 25/79 (31%), Positives = 32/79 (40%)
 Frame = +3

Query: 48  STAGHKSPQRSPQRPPALSSGFPRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASN 227
           ST   K+P       P  S   P P+   RST  T + +     P +N   P G G+  N
Sbjct: 659 STPSGKNPPTYIPLHPETSQSTPTPTTSARSTRPTASVTRRPEFPTRN-TPPFG-GNVPN 716

Query: 228 VPSPLQLKFSNSSGNVGYF 284
            PS      SN +   GYF
Sbjct: 717 GPSSTVPPASNPT-TEGYF 734


>Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical
           protein B0393.6 protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 60  HKSPQR-SPQRPPALSSGFPRPSPDRRSTLSTHATSSGA 173
           H  P   +P+ PP+  S F + S D    LST  TSS A
Sbjct: 272 HSLPTNVAPRIPPSSRSSFTQHSNDSGVVLSTPPTSSSA 310


>AF016672-8|AAB66117.4|  998|Caenorhabditis elegans Jnk interacting
           protein (scaffoldprotein) protein 1 protein.
          Length = 998

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +1

Query: 97  PYPADSRDLHQIVGPPCPPTLRLPVRGSHSRTRWPHRASVLQAMCPAHY 243
           P P+  R L  + G P PP  R+ V  S    R P   + L A C   Y
Sbjct: 281 PSPSPPRPLSPVFGQPAPPQYRMHVSQSMHLPRRPDIEAFL-ADCQNDY 328


>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
 Frame = +1

Query: 133 VGPPCPPTLRLPVRG-----SHSRTRWPHRASVL 219
           +G PCPP +  P  G     S  +T+W H +  L
Sbjct: 289 MGTPCPPCVLCPALGGSMTYSADKTQWAHHSCAL 322


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
 Frame = +1

Query: 133 VGPPCPPTLRLPVRG-----SHSRTRWPHRASVL 219
           +G PCPP +  P  G     S  +T+W H +  L
Sbjct: 330 MGTPCPPCVLCPALGGSMTYSADKTQWAHHSCAL 363


>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
            homolog protein 1 protein.
          Length = 1493

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 90   PPALSSGF--PRPSPDRRSTLSTHATSSGAW*PFKNPLAPSGIGSASNVPSPLQLKFSNS 263
            PP  SS F  P P P + +  ++++ +  +  PF++P++PS     +  P PL  K   S
Sbjct: 1433 PPRGSSVFRAPPPLPPKSNRHNSNSPTLSSEQPFEDPMSPSIF--VNTPPPPLPPKTYRS 1490

Query: 264  S 266
            S
Sbjct: 1491 S 1491


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,508,585
Number of Sequences: 27780
Number of extensions: 261996
Number of successful extensions: 1074
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -