Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L24
(465 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533524-1|CAG38555.1| 285|Homo sapiens C3orf1 protein. 39 0.007
BC012341-1|AAH12341.1| 285|Homo sapiens chromosome 3 open readi... 39 0.007
AY358633-1|AAQ88996.1| 285|Homo sapiens C3orf1 protein. 39 0.007
AL390090-1|CAB98212.1| 285|Homo sapiens c3orf1 hypothetical pro... 39 0.007
AF139077-1|AAF62372.1| 285|Homo sapiens M5-14 protein. 39 0.007
CR457158-1|CAG33439.1| 285|Homo sapiens C3orf1 protein. 39 0.010
AL390077-1|CAB98201.1| 285|Homo sapiens c3orf1 hypothetical pro... 39 0.010
AF210057-1|AAG43510.1| 285|Homo sapiens C3orf1 protein. 39 0.010
BC146825-1|AAI46826.1| 517|Homo sapiens FOXN4 protein protein. 30 3.4
AF425596-1|AAL23949.1| 448|Homo sapiens forkhead/winged helix t... 30 3.4
AL390094-1|CAB98251.1| 220|Homo sapiens c3orf1 hypothetical pro... 30 4.5
BC018537-1|AAH18537.1| 523|Homo sapiens solute carrier family 3... 29 7.9
AY358620-1|AAQ88983.1| 523|Homo sapiens VPPR2545 protein. 29 7.9
AK025657-1|BAB15206.1| 244|Homo sapiens protein ( Homo sapiens ... 29 7.9
AF529364-1|AAQ09598.1| 523|Homo sapiens NS5ATP3 protein. 29 7.9
AC017074-1|AAY14808.1| 523|Homo sapiens unknown protein. 29 7.9
>CR533524-1|CAG38555.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L ++ +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>BC012341-1|AAH12341.1| 285|Homo sapiens chromosome 3 open reading
frame 1 protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L ++ +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>AY358633-1|AAQ88996.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L ++ +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>AL390090-1|CAB98212.1| 285|Homo sapiens c3orf1 hypothetical
protein, M5-14 similar to (AE003703)140up gene product
[Dro protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L ++ +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>AF139077-1|AAF62372.1| 285|Homo sapiens M5-14 protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L ++ +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>CR457158-1|CAG33439.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L + +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLADICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>AL390077-1|CAB98201.1| 285|Homo sapiens c3orf1 hypothetical
protein, M5-14 similar to (AE003703)140up gene product
[Dro protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L + +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLADICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>AF210057-1|AAG43510.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 38.7 bits (86), Expect = 0.010
Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 SGLERVKAMYKRNEYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
SG +R++ ++ ++E + IS +L + +++ +G VYGG FIH+++ Y+
Sbjct: 53 SGWDRLRELFGKDEQQRISKDLADICKTAATAGIIGWVYGGIPAFIHAKQQYI 105
>BC146825-1|AAI46826.1| 517|Homo sapiens FOXN4 protein protein.
Length = 517
Score = 30.3 bits (65), Expect = 3.4
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -1
Query: 420 IKPPYTAPRNAPH-SEDCTTLCNSTEISSYSFLLYMALTLSKPLVATFTTGALIISLSFS 244
++PPY P A H S++ I SYS L+ MAL SK TG+L +S +S
Sbjct: 169 VRPPYPQPHVAVHSSQELHPKHYPKPIYSYSCLIAMALKNSK-------TGSLPVSEIYS 221
Query: 243 FL 238
F+
Sbjct: 222 FM 223
>AF425596-1|AAL23949.1| 448|Homo sapiens forkhead/winged helix
transcription factor FOXN4 protein.
Length = 448
Score = 30.3 bits (65), Expect = 3.4
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -1
Query: 420 IKPPYTAPRNAPH-SEDCTTLCNSTEISSYSFLLYMALTLSKPLVATFTTGALIISLSFS 244
++PPY P A H S++ I SYS L+ MAL SK TG+L +S +S
Sbjct: 129 VRPPYPQPHVAVHSSQELHPKHYPKPIYSYSCLIAMALKNSK-------TGSLPVSEIYS 181
Query: 243 FL 238
F+
Sbjct: 182 FM 183
>AL390094-1|CAB98251.1| 220|Homo sapiens c3orf1 hypothetical
protein, M5-14 alternatively spliced product, similar to
(A protein.
Length = 220
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 332 EYEEISVELHSVVQSSLCGAFLGAVYGG---FIHSREAYL 442
E + IS +L ++ +++ +G VYGG FIH+++ Y+
Sbjct: 1 EQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYI 40
>BC018537-1|AAH18537.1| 523|Homo sapiens solute carrier family 35,
member F5 protein.
Length = 523
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 354 STEISSYSFLLYMALTLSKPLVATFTTGALIISLSFSFLVWK 229
S+E++SY F Y +KP +TF ++ + F++WK
Sbjct: 86 SSELTSYVFTQY-----NKPFFSTFAKTSMFVLYLLGFIIWK 122
>AY358620-1|AAQ88983.1| 523|Homo sapiens VPPR2545 protein.
Length = 523
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 354 STEISSYSFLLYMALTLSKPLVATFTTGALIISLSFSFLVWK 229
S+E++SY F Y +KP +TF ++ + F++WK
Sbjct: 86 SSELTSYVFTQY-----NKPFFSTFAKTSMFVLYLLGFIIWK 122
>AK025657-1|BAB15206.1| 244|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22004 fis, clone HEP06871. ).
Length = 244
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 354 STEISSYSFLLYMALTLSKPLVATFTTGALIISLSFSFLVWK 229
S+E++SY F Y +KP +TF ++ + F++WK
Sbjct: 80 SSELTSYVFTQY-----NKPFFSTFAKTSMFVLYLLGFIIWK 116
>AF529364-1|AAQ09598.1| 523|Homo sapiens NS5ATP3 protein.
Length = 523
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 354 STEISSYSFLLYMALTLSKPLVATFTTGALIISLSFSFLVWK 229
S+E++SY F Y +KP +TF ++ + F++WK
Sbjct: 86 SSELTSYVFTQY-----NKPFFSTFAKTSMFVLYLLGFIIWK 122
>AC017074-1|AAY14808.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 354 STEISSYSFLLYMALTLSKPLVATFTTGALIISLSFSFLVWK 229
S+E++SY F Y +KP +TF ++ + F++WK
Sbjct: 86 SSELTSYVFTQY-----NKPFFSTFAKTSMFVLYLLGFIIWK 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,375,651
Number of Sequences: 237096
Number of extensions: 1258988
Number of successful extensions: 2025
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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