Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L23
(501 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein. 31 1.7
U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein p... 31 1.7
BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protei... 31 1.7
BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protei... 31 1.7
AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein. 31 1.7
AY534911-1|AAT02709.1| 578|Homo sapiens hypothetical rhabdomyos... 30 3.9
AY028423-1|AAK27730.1| 852|Homo sapiens PRIP-interacting protei... 30 3.9
AF432215-1|AAL99922.1| 853|Homo sapiens CLL-associated antigen ... 30 3.9
AF286340-1|AAK83025.1| 853|Homo sapiens hepatocellular carcinom... 30 3.9
AF272900-1|AAF86274.1| 809|Homo sapiens cone photoreceptor cycl... 30 5.2
AF228520-1|AAF80179.1| 610|Homo sapiens cone photoreceptor cGMP... 30 5.2
>U65960-1|AAB07135.1| 171|Homo sapiens HASPP28 protein.
Length = 171
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 DAKENDPERSKKNDAKNEMSEEIEENSAKRR------NIDDANNVGVYNCTCTDTIFERP 180
D DP++ KK+ +E +E ++ KR+ +I++ N V T + P
Sbjct: 46 DGAAGDPKKEKKSLDSDESEDEDDDYQQKRKGVEGFIDIENPNRVAQTTKKVTQLDLDGP 105
Query: 181 PPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
S R+ + + + + +H + K Q+K ++ I+ Q + A + +E
Sbjct: 106 KELSRREREEIEKQKAKERYMRMHLAGKTEQAKADLARLAIIRKQREEAARKKEE 160
>U41745-1|AAC50462.1| 181|Homo sapiens PDGF associated protein
protein.
Length = 181
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 DAKENDPERSKKNDAKNEMSEEIEENSAKRR------NIDDANNVGVYNCTCTDTIFERP 180
D DP++ KK+ +E +E ++ KR+ +I++ N V T + P
Sbjct: 45 DGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGP 104
Query: 181 PPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
S R+ + + + + +H + K Q+K ++ I+ Q + A + +E
Sbjct: 105 KELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEE 159
>BC007873-1|AAH07873.1| 181|Homo sapiens PDGFA associated protein 1
protein.
Length = 181
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 DAKENDPERSKKNDAKNEMSEEIEENSAKRR------NIDDANNVGVYNCTCTDTIFERP 180
D DP++ KK+ +E +E ++ KR+ +I++ N V T + P
Sbjct: 45 DGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGP 104
Query: 181 PPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
S R+ + + + + +H + K Q+K ++ I+ Q + A + +E
Sbjct: 105 KELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEE 159
>BC000684-1|AAH00684.1| 181|Homo sapiens PDGFA associated protein 1
protein.
Length = 181
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 DAKENDPERSKKNDAKNEMSEEIEENSAKRR------NIDDANNVGVYNCTCTDTIFERP 180
D DP++ KK+ +E +E ++ KR+ +I++ N V T + P
Sbjct: 45 DGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGP 104
Query: 181 PPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
S R+ + + + + +H + K Q+K ++ I+ Q + A + +E
Sbjct: 105 KELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEE 159
>AC004922-1|AAF03506.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +1
Query: 19 DAKENDPERSKKNDAKNEMSEEIEENSAKRR------NIDDANNVGVYNCTCTDTIFERP 180
D DP++ KK+ +E +E ++ KR+ +I++ N V T + P
Sbjct: 45 DGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGP 104
Query: 181 PPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
S R+ + + + + +H + K Q+K ++ I+ Q + A + +E
Sbjct: 105 KELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEE 159
>AY534911-1|AAT02709.1| 578|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.15 protein.
Length = 578
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNV 135
A GT+ D E DP K + K +I+EN A + DD+ ++
Sbjct: 129 ASGTDGDESEEDPPEHKPSKLKRSHELDIDENPAS--DFDDSGSL 171
>AY028423-1|AAK27730.1| 852|Homo sapiens PRIP-interacting protein
PIPMT protein.
Length = 852
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNV 135
A GT+ D E DP K + K +I+EN A + DD+ ++
Sbjct: 404 ASGTDGDESEEDPPEHKPSKLKRSHELDIDENPAS--DFDDSGSL 446
>AF432215-1|AAL99922.1| 853|Homo sapiens CLL-associated antigen
KW-2 protein.
Length = 853
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNV 135
A GT+ D E DP K + K +I+EN A + DD+ ++
Sbjct: 404 ASGTDGDESEEDPPEHKPSKLKRSHELDIDENPAS--DFDDSGSL 446
>AF286340-1|AAK83025.1| 853|Homo sapiens hepatocellular
carcinoma-associated antigen 137 protein.
Length = 853
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNV 135
A GT+ D E DP K + K +I+EN A + DD+ ++
Sbjct: 404 ASGTDGDESEEDPPEHKPSKLKRSHELDIDENPAS--DFDDSGSL 446
>AF272900-1|AAF86274.1| 809|Homo sapiens cone photoreceptor cyclic
nucleotide-gated channel beta subunit protein.
Length = 809
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNID-DANNVGVYNCTCTDTIFER 177
+ G E + KEN+ ++ + D + E ++ +EN K + + + + CT + E
Sbjct: 706 SEGGEEEGKENEDKQKENEDKQKENEDKGKENEDKDKGREPEEKPLDRPECTASPIAVEE 765
Query: 178 PPPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILE 297
P S R+ G +++ +II + +E + +E
Sbjct: 766 -EPHSVRRTVLPRGTSRQS--LIISMAPSAEGGEEVLTIE 802
>AF228520-1|AAF80179.1| 610|Homo sapiens cone photoreceptor
cGMP-gated cation channel beta-subunit protein.
Length = 610
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNID-DANNVGVYNCTCTDTIFER 177
+ G E + KEN+ ++ + D + E ++ +EN K + + + + CT + E
Sbjct: 507 SEGGEEEGKENEDKQKENEDKQKENEDKGKENEDKDKGREPEEKPLDRPECTASPIAVEE 566
Query: 178 PPPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILE 297
P S R+ G +++ +II + +E + +E
Sbjct: 567 -EPHSVRRTVLPRGTSRQS--LIISMAPSAEGGEEVLTIE 603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.128 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,917,794
Number of Sequences: 237096
Number of extensions: 1309363
Number of successful extensions: 6463
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6458
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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