Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L23
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 31 0.62
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 30 0.82
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 30 1.1
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 30 1.1
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 30 1.1
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 30 1.1
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 30 1.1
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 30 1.1
AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical ... 30 1.1
Z83236-6|CAB05783.1| 132|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z82268-6|CAB05194.1| 163|Caenorhabditis elegans Hypothetical pr... 28 3.3
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 28 3.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 3.3
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 28 3.3
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 27 7.6
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 27 7.6
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 27 7.6
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 27 7.6
AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 27 7.6
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 27 7.6
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 30.7 bits (66), Expect = 0.62
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 13 ESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANN 132
E + +E D ++ KK+ KN+ SEE E+ ++ +D+++
Sbjct: 88 EDEEEEEDKDKKKKDKKKNKDSEEEEDKKKDKKKKNDSSD 127
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +1
Query: 25 KENDPERSKKNDAK--NEMSEEIEENSAKRRN 114
K+++ E KK D K N+ S+E EE + KR+N
Sbjct: 107 KDSEEEEDKKKDKKKKNDSSDESEEENKKRKN 138
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 19 DAKENDPERSKKNDAKNEMSEEIEENSAKRRN 114
+ ++ ++ KKND+ +E EE ++ KR+N
Sbjct: 111 EEEDKKKDKKKKNDSSDESEEENKKRKNKRKN 142
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 25 KENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTI 168
K+N+ + KK++ + + EE E+NS DAN + + + + T+ +
Sbjct: 231 KKNNEDAKKKDNTQKDADEEEEDNSDDEPETLDANKIDIMSPSQTEEL 278
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 279 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 331
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 332 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 377
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 277 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 329
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 330 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 375
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 279 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 331
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 332 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 377
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 279 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 331
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 332 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 377
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 277 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 329
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 330 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 375
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 279 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 331
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 332 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 377
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 25 KENDPERSKKNDAKNEMSEEIEENS 99
K+ E+ KK++AKN+ + EIEEN+
Sbjct: 515 KDAKAEKEKKDEAKNDKNMEIEENA 539
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +1
Query: 16 SDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPRSF 195
S+A+EN R + + N+ N ++RR D ++ D + RP R
Sbjct: 279 SEARENRRARLEHHRVANQNRHHRNRNGSRRRRSDSDSD-------SDDMVLPRPDKRQS 331
Query: 196 RKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGAS 333
R G + + I+ + K QS + ++++ + + GAS
Sbjct: 332 RPHMHNRGERERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGAS 377
>AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical
protein C16C4.4 protein.
Length = 278
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYN 147
ARG + +E+D E S +N+ +++ SE EN + N++D + V N
Sbjct: 220 ARGKITSLEESDDESSSENE-EDDSSESHSENDSSSDNLEDEFSECVIN 267
>Z83236-6|CAB05783.1| 132|Caenorhabditis elegans Hypothetical
protein K10H10.7 protein.
Length = 132
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 37 PERSKKN-DAKNEMSEEIEENSAKRRNIDDANNVGVYNCTC 156
PER KK D +E +E +EN + N D+ +N C C
Sbjct: 89 PERKKKKEDGGDEGDDENKENKDNKDNKDNKDNKDNNGCGC 129
>Z82268-6|CAB05194.1| 163|Caenorhabditis elegans Hypothetical
protein F52B11.5 protein.
Length = 163
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 10 TESDAKENDPERSKKNDAKNEMSEEIEENSAKRRN 114
T SD ND ++D N++ +EEN K+ N
Sbjct: 16 TVSDGVHNDVTLKNEHDVANDVMRYLEENYVKKEN 50
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -2
Query: 500 STAKESGCLSHHSSDDIISNVPTSPVAPSTRTFKSDTF*RSLRERDKLSILLSCILLAPI 321
S++ +SG + + SD SN +P A +D F RE + + I+ + I+ A +
Sbjct: 227 SSSSDSGLSTDNDSDR--SNAEAAPPADPPSVDSTDFF-SFEREEEDIQIVHNYIVTAKV 283
Query: 320 SNWYSKIGSRITSSLD 273
+YS+ + SLD
Sbjct: 284 KAYYSEKLKNVEFSLD 299
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +1
Query: 16 SDAKENDPERS--KKNDAKNEMSEEIEENSA 102
SDA E+D E S +++D ++E SEE EE+S+
Sbjct: 411 SDADEDDDEESSDEESDEESEDSEESEESSS 441
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +1
Query: 16 SDAKENDPERS--KKNDAKNEMSEEIEENSA 102
SDA E+D E S +++D ++E SEE EE+S+
Sbjct: 411 SDADEDDDEESSDEESDEESEDSEESEESSS 441
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 353 ILLSCILLAPISNWYSKIGSRITSSLDCLTLCEQWIIMS*ASLS 222
+ L I P W S +G+ + ++ C W ++ ASLS
Sbjct: 770 VYLDLIDNMPTDTWQSILGTLVCMAMVCFVFLNNWFTVAIASLS 813
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -2
Query: 353 ILLSCILLAPISNWYSKIGSRITSSLDCLTLCEQWIIMS*ASLS 222
+ L I P W S +G+ + ++ C W ++ ASLS
Sbjct: 770 VYLDLIDNMPTDTWQSILGTLVCMAMVCFVFLNNWFTVAIASLS 813
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 13 ESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDA 126
+ + +EN+ E +++D E EE +E + DD+
Sbjct: 598 DEEEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDS 635
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 13 ESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDA 126
+ + +EN+ E +++D E EE +E + DD+
Sbjct: 608 DEEEEENESEEEEEDDEDEESEEESDEEDEEEEEEDDS 645
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 1 ARGTESDAKENDPERSKKNDAKNEMSEEIEENSAKRRN 114
AR +SD+ E+D E + +D + E + +RR+
Sbjct: 57 ARNYDSDSSESDRETDRDDDRRRRRRRESSDEEDRRRH 94
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.6
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 4 RGTESDAKEN-DPERSKKNDAKNEMSEEIEENSAKRRNIDD-ANNVGVYNCTCTDTIFER 177
+ E+DA+ + D E + + ++ EEIE + + IDD A V ++ + E+
Sbjct: 579 KSVENDAESDADDEEIEDEEEMDDEEEEIEISDEEEEEIDDEAEEEAVVEEEASEAV-EK 637
Query: 178 PPPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
P K +E + I K Q K+++I E L+ Q G S+ E
Sbjct: 638 DPKLKASKNSMDRIMTQEDFKNI-----KAYQLKKQLIGEKRLKKQMGKGRSQADE 688
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.6
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 4 RGTESDAKEN-DPERSKKNDAKNEMSEEIEENSAKRRNIDD-ANNVGVYNCTCTDTIFER 177
+ E+DA+ + D E + + ++ EEIE + + IDD A V ++ + E+
Sbjct: 579 KSVENDAESDADDEEIEDEEEMDDEEEEIEISDEEEEEIDDEAEEEAVVEEEASEAV-EK 637
Query: 178 PPPRSFRKWKAVNGADKEAYDIIIHCSHKVRQSKEEVILEPILEYQFDMGASRMQE 345
P K +E + I K Q K+++I E L+ Q G S+ E
Sbjct: 638 DPKLKASKNSMDRIMTQEDFKNI-----KAYQLKKQLIGEKRLKKQMGKGRSQADE 688
>AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical
protein Y39G10AR.15 protein.
Length = 704
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 13 ESDAKENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYN 147
E++ + DP+RSK N + + EE N+ D + VY+
Sbjct: 504 EAEGLKLDPKRSKPNVKEKDQKSPFEEPRKVAFNVSDKCTLHVYS 548
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 13 ESDAK-ENDPERSKKNDAKNEMSEEIEENSAKRRNIDDANNVGVYNCTCTDTIFERPPPR 189
ES+ K +D + + + E+ + E +R+ +A+ CTC+ TI ++ PP
Sbjct: 32 ESNLKIASDEYKIRMKNISREVGSVVLEEKRGKRDYTEASK-----CTCSSTISQKCPPG 86
Query: 190 SFRKWKAVNGAD 225
S K GAD
Sbjct: 87 S----KGAPGAD 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.128 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,874,928
Number of Sequences: 27780
Number of extensions: 213713
Number of successful extensions: 749
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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