Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L20
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 109 7e-24
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 109 7e-24
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 100 5e-21
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 99 1e-20
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 71 3e-12
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 31 1.6
AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens ... 30 3.8
U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein L... 30 5.0
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 30 5.0
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 30 5.0
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 30 5.0
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 30 5.0
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 30 5.0
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 30 5.0
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 30 5.0
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 30 5.0
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 30 5.0
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 30 5.0
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 29 8.8
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 29 8.8
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 29 8.8
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 109 bits (261), Expect = 7e-24
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 99.5 bits (237), Expect = 5e-21
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GR GK
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVFLKQLASGLL 174
Query: 199 F-TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 LVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 219
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 98.7 bits (235), Expect = 1e-20
Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 115 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 174
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
T ++ PLRR Q++VI TSTK+D+ + K+P HL DAYFK
Sbjct: 175 VTDLWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 70.5 bits (165), Expect = 3e-12
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 FYPTQDKIR-CRSHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXX 198
+YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 54 YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL 113
Query: 199 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFK 330
TGP + + K K+P HL DAYFK
Sbjct: 114 VTGPLVSIEFLYEEHTRNLSLPLQPKSISAIVKIPKHLTDAYFK 157
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 182 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLKLL 66
G TP+ T+ N+ TV VR G+ L CL+K L
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKAL 449
>AK092587-1|BAC03920.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ35268 fis, clone PROST2005285, weakly similar to
CYCLIN G-ASSOCIATED KINASE (EC 2.7.1.-). ).
Length = 251
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 150 WQACRARWSVAEWSATLH-WTFCFQRVS-PAQDSAALCHWNID*GRPGRFQATGA 308
W C A WS +AT H W+ C S Q C W R G +A GA
Sbjct: 122 WSICCALWSRRLQTATFHPWSICCTTWSRRLQTGTCHCRWAWQPSRTGWPEARGA 176
>U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein
LMX1B/LMX1.2 protein.
Length = 161
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 81 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 137
Query: 60 RT 55
T
Sbjct: 138 ET 139
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 173 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 229
Query: 60 RT 55
T
Sbjct: 230 ET 231
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 60 RT 55
T
Sbjct: 255 ET 256
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 60 RT 55
T
Sbjct: 255 ET 256
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 240 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 61
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 60 RT 55
T
Sbjct: 232 ET 233
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 ARGKSRKSFYPTQDKIRCRSH--GKSFSK 81
+R K KS P++DK R RSH GKS SK
Sbjct: 240 SRSKKEKSRSPSKDKSRSRSHSAGKSRSK 268
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 ARGKSRKSFYPTQDKIRCRSH--GKSFSK 81
+R K KS P++DK R RSH GKS SK
Sbjct: 240 SRSKKEKSRSPSKDKSRSRSHSAGKSRSK 268
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 29.1 bits (62), Expect = 8.8
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 1 ARGKSRKSFYPTQDKIRCRSH--GKSFSK 81
+R K KS P++DK R RSH GKS SK
Sbjct: 165 SRSKKEKSRSPSKDKSRSRSHSAGKSRSK 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,610,856
Number of Sequences: 237096
Number of extensions: 1289551
Number of successful extensions: 3342
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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