Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L18
         (190 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    21   6.8  
Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    20   9.0  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    20   9.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    20   9.0  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    20   9.0  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1201

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 42 RFPEGWPYCHVASC 1
          R P  WPY   +SC
Sbjct: 48 RSPPHWPYLLCSSC 61


>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
           protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +1

Query: 88  FFILLYFNYKFLC 126
           + + LY+N +F+C
Sbjct: 23  WMVALYYNNRFIC 35


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 73  IIYSSFFILLYFNYKFLC 126
           ++YSS F+L  F    +C
Sbjct: 100 VLYSSIFVLGVFGNVLVC 117


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 44  PVWRRAGR 67
           P WRRAGR
Sbjct: 242 PRWRRAGR 249


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = -2

Query: 45  GRFPEGWPYCHV 10
           G+   GW  CH+
Sbjct: 257 GKLKVGWSICHI 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,061
Number of Sequences: 2352
Number of extensions: 1988
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 41
effective length of database: 467,547
effective search space used:  9818487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)